ggKbase home page

SCNpilot_cont_300_bf_scaffold_74_curated_26

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(22317..23147)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00035E26E6 similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 273.0
  • Bit_score: 510
  • Evalue 8.00e-142
transcriptional regulator, AraC family similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 276.0
  • Bit_score: 497
  • Evalue 3.80e-138
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AGU52177.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 276.0
  • Bit_score: 497
  • Evalue 1.70e-137

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 831
ATGCAGCGAACGAGGACGACGCCGGCGGCAAGCGGCGCCGCACGGCAGGGCGAGCGCCTGATGTGGCTCACGCCGCACCGCGTGTTCTACGCCGGCCTGCTCGGCGCGGCCGCCGAACGCACGATGGGCGGGCACGGCGTGTACGTGTCGCCCGCCGGCGCGCCGCCGAACCGCATCCGCGTCGGCGGCGGCGCGTGGCTCACCGGTGAATTCATCGTCGTGCCGCCGCACGTGCCGCACCAGGTGGAGAGCGCGCATCCGCTGATCTTCAACCTGCTGGTGGAGTCGGAGTCGGTCGACCCCGCGCGCCTGCCGGCCTTCCTGCAGCACTGCGGCCCGGTCGATGCGCCGGCCTTCGTGCAGCGCGTGCGCGAGGCGCATGCGCACCTGCTGGCCGCCTCTGCGCGCGGCATGAACTTCGAGGGCTTCGACTTCGACGCGCTGTTCTTCGGCGAGGCGCTCGCGCCGCGCGTGCTCGACGCGCGCATCCGCAAGGTGGCCGACGCCATCAACGCCGACCCCGCCACGCCGATGTCGGCCGAGGAGTGCGCCGCGTCGGTGCACCTGTCGTTCTCGCGCTTCCTGCACCTGTTCAAGCAGGAGACCGGCATGGCCTTCCGCGCCTTCCGCGCATGGAAGCGCGCGCGCAGCCTGCTGCGCTACGTGCAGCAGGGCAGCACGCTCACCGACATCGCGCTCGACACCGGCTACCCCGACTCCACGCATTTCAGCCATTCGATCCGCCAGGTCTACGGCCTCAAGCCCAGCGACATCGTGGCCGGCTCGCGCCGCCTCGCGCTGCACGACCTGGCCGGCGGCTTCCGTCAGTAG
PROTEIN sequence
Length: 277
MQRTRTTPAASGAARQGERLMWLTPHRVFYAGLLGAAAERTMGGHGVYVSPAGAPPNRIRVGGGAWLTGEFIVVPPHVPHQVESAHPLIFNLLVESESVDPARLPAFLQHCGPVDAPAFVQRVREAHAHLLAASARGMNFEGFDFDALFFGEALAPRVLDARIRKVADAINADPATPMSAEECAASVHLSFSRFLHLFKQETGMAFRAFRAWKRARSLLRYVQQGSTLTDIALDTGYPDSTHFSHSIRQVYGLKPSDIVAGSRRLALHDLAGGFRQ*