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SCNpilot_cont_300_bf_scaffold_74_curated_35

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 31408..32037

Top 3 Functional Annotations

Value Algorithm Source
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VBI6_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 209.0
  • Bit_score: 403
  • Evalue 1.00e-109
tripartite ATP-independent periplasmic transporter dctq component similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 209.0
  • Bit_score: 403
  • Evalue 3.30e-110
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:ADU39786.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 209.0
  • Bit_score: 403
  • Evalue 1.50e-109

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGCAATCTTTCCTGCTGGCGGTCGACCGGTTCTCCACCTGGATCGGCAAGACCTTCGCCTGGTGCGCGCTGCTGCTCACGCTGCTCATCAGCTGGGAGGTGTTCTCCCGCTATGCGCTCAACAAGCCGCACGCCTGGGTGCTGGACGCGCAGATCATGCTGTACGGCGCGATGTTCATGACCGCCGGCGCCTACACGCTCTCCAAGAACGGCCACGTGCGCGGCGACGTGCTCTACGGCTTCTTCCGTCCGCGCACGCAGGCGATGGTCGACCTGACGCTGTACATCGTGTTCTTCTTGCCGGGCATCGTGGCGCTCACCTGGGCCGGCTGGATCTACGCGGGCGAGTCGCTCGCCATCCGCGAGCAGACCTTCTCGGCCGAGCCGCTGCCGCTGTACCCCTTCAAGTACGTCATTCCGCTCGCGGGCTTCACGCTGCTGCTGCAGGGCATCGTCGAGATCATCCGCTGCGTCCAATGCATCCGACAAGGCAAGTGGCCGTCGCGCGAGCAGGACGTGGAGGAAGTCGACGTCGAGAAGCTCAAGGAAATGGTGCACGTGAAAGACGCGGACATCGCCGCGCTCGACCGCGTGGTGGTGGCGCAAACCGCCAGCGAGGGCGCGCGATGA
PROTEIN sequence
Length: 210
MQSFLLAVDRFSTWIGKTFAWCALLLTLLISWEVFSRYALNKPHAWVLDAQIMLYGAMFMTAGAYTLSKNGHVRGDVLYGFFRPRTQAMVDLTLYIVFFLPGIVALTWAGWIYAGESLAIREQTFSAEPLPLYPFKYVIPLAGFTLLLQGIVEIIRCVQCIRQGKWPSREQDVEEVDVEKLKEMVHVKDADIAALDRVVVAQTASEGAR*