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SCNpilot_cont_300_bf_scaffold_74_curated_36

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 32034..33920

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate ABC transporter n=1 Tax=Variovorax paradoxus RepID=UPI000370DFF1 similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 657.0
  • Bit_score: 1137
  • Evalue 0.0
Putative TRAP dicarboxylate transporter, subunit DctM {ECO:0000313|EMBL:AGU52188.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.0
  • Coverage: 652.0
  • Bit_score: 1119
  • Evalue 0.0
putative TRAP dicarboxylate transporter, subunit DctM similarity KEGG
DB: KEGG
  • Identity: 89.0
  • Coverage: 652.0
  • Bit_score: 1119
  • Evalue 0.0

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1887
ATGATCCGCCGCGAACTCTGGTTCGGCCTGTCGTTCATGGCGCTGATCGTGATCGGCGCGGGCGCGGTGCTGGCGAACGCGCCGACCATCACCAACGGCCACCTCGGGCTGCTGATGCTGTCGCTGGTGGTCGTGGCCATCATGCTGGGCTTTCCCACAGCGTTCACGCTGATGGGCATGGGCATGATCTTCACCTGGCTCGCCTACGACCGCGACTGGAACCGCACGCTCGACCTGATGGTGCAGTCGGCCTTCAAGACCATGGCCAACGACGTGCTCATCGCGGTGCCGCTGTTCGTCTTCATGGGCTACCTGGTGGAGCGCGCGAACCTCATCGAGTCGCTGTTCAAGAGCCTGCACCTGGCGCTCGCTCGGCTGCCGGGCGCACTCGCGGTGGCGACGCTGGTCACCTGCACCATCTTCGCGACGGCCACCGGCATCGTCGGCGCGGTGGTCACGCTGATGGGCCTGCTGGCGTTGCCCGCCATGCTGCGCGCGGGCTACAGCGTGCCGCTGGCGGCGGGGTCGATCACGGCGGGCGGCTGCCTGGGCATCCTGCTGCCGCCGTCGGTGCTGCTGATCGTCTATGGCGCGACGGCGGGCGTGTCGGTGGTGCAGCTGTATGCGGGCGCCTTCTTCCCGGGGCTGATGCTGTCGTCGCTCTACGTGCTGTACGTGATCATCGTCGCGTGGCTCAAGCCGCAATGGGCACCGCCGCTGTCGCAGGCCGAGCGCGTGGTGCCGCTGCCGCCGCTGTCGCAGCGGCTGGCCGACAGCCCCGCCGCGCATGCGCTGGTGGGGCTGCTGAAGGGCAGGCGCAATGCCGGCGTGCCGTTCTCGCATGTGCTGAGGCAGCTCGGCATCGTCGCGATGCCGGGAGTGATCTTCCTGCTGCTCGCGGCCTTCAGCTACAAGGCCGTGACGACCGTGGAGGCACAGGCGCGCTACGACATCGAGGAGATCGGCGCCGTGCGCAGCGCCCCCAGTGAAGGGGGCCTGCAGGAACCGCCGTCCGAAGGAGGCTTGCAGGAGCCTCCCGGCGGCGAGCAGGCACCGGCGCCCGTCGCTTCGCCTGCGCCGCTGGCCGAACCGGCGCAGGCGACGGCGGACACGCCCGAAGCCGCCACCGAGCGCCCCGCGCCCACTTGGTGGTGGGTCAGCTTCGCGATCTTCGGCGCCCTCGTCACGCTGTTCTATCTGTTCCTGAGCTTCGCGCGGCTCGAGATCTTCAAGATGCTGCTGGCATCGTTCTTTCCGCTGATGCTGCTGATCTTCTCGGTGCTGGGCTCGATCGTGCTCGGCCTGGCGACGCCAACCGAGGCGGCAGCCATGGGCGCGCTGGGCGGCATGCTGCTGGCCGCCGCCTACCGGCGGCTGAACCTGGCGGTGCTCAAGGAGTCGGTGTTCCTCACCGCCAAGACCTCGGCCATGGTGTGCTGGCTGTTCGTGGGCTCGGCCATCTTCTCGGCCGCGTTCGCGCTGCTGGGCGGGCAGGCGCTGGTGGAAGAGTGGGTGCTCGGCATGAACCTCACGAAGGTGGAGTTCCTGATCCTGAGCCAGGTCATCATCTTCCTGCTGGGCTGGCCGCTGGAGTGGACCGAGATCATCGTGATCTTCATGCCCATCTTCATCCCGCTGCTCGACAACTTCGGCGTCGACCCGCTGTTCTTCGGGCTCCTGGTGGCGCTGAACCTGCAGACCGCCTTCCTCTCGCCCCCGGTGGCCATGGCCGCCTTCTACCTGAAGGGCGTGAGCCCGCCGCACGTGACGCTGAACCAGATCTTCCTGGGCATGCTGCCGTTCATGGGCATCCAGGTGCTGGCGATCGTGCTGCTGTACATGTGGCCGCAGATCGGGTTGTGGTTGCCGCAGTTGCTTTACAAGTAG
PROTEIN sequence
Length: 629
MIRRELWFGLSFMALIVIGAGAVLANAPTITNGHLGLLMLSLVVVAIMLGFPTAFTLMGMGMIFTWLAYDRDWNRTLDLMVQSAFKTMANDVLIAVPLFVFMGYLVERANLIESLFKSLHLALARLPGALAVATLVTCTIFATATGIVGAVVTLMGLLALPAMLRAGYSVPLAAGSITAGGCLGILLPPSVLLIVYGATAGVSVVQLYAGAFFPGLMLSSLYVLYVIIVAWLKPQWAPPLSQAERVVPLPPLSQRLADSPAAHALVGLLKGRRNAGVPFSHVLRQLGIVAMPGVIFLLLAAFSYKAVTTVEAQARYDIEEIGAVRSAPSEGGLQEPPSEGGLQEPPGGEQAPAPVASPAPLAEPAQATADTPEAATERPAPTWWWVSFAIFGALVTLFYLFLSFARLEIFKMLLASFFPLMLLIFSVLGSIVLGLATPTEAAAMGALGGMLLAAAYRRLNLAVLKESVFLTAKTSAMVCWLFVGSAIFSAAFALLGGQALVEEWVLGMNLTKVEFLILSQVIIFLLGWPLEWTEIIVIFMPIFIPLLDNFGVDPLFFGLLVALNLQTAFLSPPVAMAAFYLKGVSPPHVTLNQIFLGMLPFMGIQVLAIVLLYMWPQIGLWLPQLLYK*