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SCNpilot_cont_300_bf_scaffold_72_curated_152

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 160349..161377

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI000370E284 similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 342.0
  • Bit_score: 652
  • Evalue 2.80e-184
Variovorax paradoxus strain MEDvA23 contig_23, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33316.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 342.0
  • Bit_score: 581
  • Evalue 8.40e-163
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 342.0
  • Bit_score: 579
  • Evalue 7.10e-163

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
ATGGATTTGCAGATTGCCCTGTTGCTGGGGCAGGACGGCATCGTGAACGGCGCGGTCTACGGACTGATGGCGCTCGCGCTGGTGCTGGTGTTTTCGGTCACGCGCGTGATCTTCATCCCGCAGGGCGAGTTCGTCGCCTTCGGCGCGCTCTCCATGGCCGCACTGCAGGGCGGCCGCGCGCCTTCCACGCTGTGGCTGCTGCTGGCGCTGGCGGCGATCGTGCTGGTGGTGGAGGCCTGGCGCTGGAAGCGCGGCGCCACCGTCGACTGGCGTTCGGCGCTGACCTGGTGCGTGGCCTTCCCGGCCGTGGCCGCCGTGCTGATACTGGGCTTCAAGCCCACGTCGCTCGCGATGCAGTCGCTCGCCACGCTGGTGCTGATCGCGCCGCTGGGCCCGCTGCTCTACCGCGTCGCCTACCGCCCGCTGGCCGACGCCAGCGTGCTGATGCTGCTGATCGTCTCGGTGGCGCTGCACGGCGTGCTGGTCGGCCTGGGTCTCTTCTTCTTCGGTGCCGAGGGCTCGCGCACCAGCGCGTTCTCCGAAGCGCGCTTCGACCTCGGCGGCATTCCGGTCAACGGCCAGTCGCTGGTGGTGGTCGGCGTCACGCTGGTGCTGGTGATCGCCATGTTCTGGTTCTTCGGCCGCTCGATGATCGGCAAGGCGCTGCGCGCCACCGCCATCAACCGCGTCGGCGCACGGCTGTCGGGCATTCCCACCGAACTGTCGGGCGACCTGAGCTTCGCGCTGGCCGCAGTCATCGGCGCCATCTCGGGCCTGCTGATCGCTCCCATCACCACGGTCTACTACGACACCGGCTTCCTGATCGGCCTGAAGGGCTTCGTGGCGGCCATCGTCGGCGGGCTCGCGAGCTATCCGCTGGCGCTCGCGGGCGCGCTGCTGGTCGGCCTGCTCGAGGCCTTCTCCTCTTTCTGGGCCAGCGCGTACAAGGAAGTGCTGGTCTTCACCCTGATCATCCCGGTGCTGCTGTGGCGCTCACTGAACAGCCATCACGTGGAGGACGAGGAATGA
PROTEIN sequence
Length: 343
MDLQIALLLGQDGIVNGAVYGLMALALVLVFSVTRVIFIPQGEFVAFGALSMAALQGGRAPSTLWLLLALAAIVLVVEAWRWKRGATVDWRSALTWCVAFPAVAAVLILGFKPTSLAMQSLATLVLIAPLGPLLYRVAYRPLADASVLMLLIVSVALHGVLVGLGLFFFGAEGSRTSAFSEARFDLGGIPVNGQSLVVVGVTLVLVIAMFWFFGRSMIGKALRATAINRVGARLSGIPTELSGDLSFALAAVIGAISGLLIAPITTVYYDTGFLIGLKGFVAAIVGGLASYPLALAGALLVGLLEAFSSFWASAYKEVLVFTLIIPVLLWRSLNSHHVEDEE*