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SCNpilot_cont_300_bf_scaffold_72_curated

Search features with annotation key words

Displaying items 151-180 of 214 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_72_curated_151
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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159007..160152
DNA (1146bp) protein (382aa)
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00035F0FAD
ABC transporter, branched-chain amino acid-binding protein
ABC transporter, branched-chain amino acid-binding protein {ECO:0000313|EMBL:AGU48411.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_72_curated_152
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

160349..161377
DNA (1029bp) protein (343aa)
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI000370E284
Variovorax paradoxus strain MEDvA23 contig_23, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33316.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
SCNpilot_cont_300_bf_scaffold_72_curated_153
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

161374..163287
DNA (1914bp) protein (638aa)
metal-dependent hydrolase n=1 Tax=Variovorax paradoxus RepID=UPI00035DA088
ABC transporter related protein {ECO:0000313|EMBL:ADU35537.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein; K01998 branched-chain amino acid transport system permease protein
SCNpilot_cont_300_bf_scaffold_72_curated_154
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

163284..164015
DNA (732bp) protein (244aa)
metal-dependent hydrolase n=1 Tax=Variovorax paradoxus RepID=UPI00036EEBCA
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EJL70205.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_72_curated_155
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

164160..166220
DNA (2061bp) protein (687aa)
phenylacetic acid degradation protein paan; K02618 oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.7.1.16 1.17.1.7]
enoyl-CoA hydratase n=1 Tax=Variovorax paradoxus RepID=UPI00037CCEBC
Phenylacetic acid degradation protein paaN {ECO:0000313|EMBL:EJL70206.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
SCNpilot_cont_300_bf_scaffold_72_curated_156
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

166217..166984
DNA (768bp) protein (256aa)
short-chain dehydrogenase/reductase sdr; K00065 2-deoxy-D-gluconate 3-dehydrogenase [EC:1.1.1.125]
2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI00036F9ED7
Variovorax paradoxus strain MEDvA23 contig_23, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33319.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
SCNpilot_cont_300_bf_scaffold_72_curated_157
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

167014..167574
DNA (561bp) protein (187aa)
Isoprenylcysteine carboxyl methyltransferase (ICMT) family protein n=1 Tax=Variovorax sp. CF313 RepID=J2SX39_9BURK
Isoprenylcysteine carboxyl methyltransferase (ICMT) family protein {ECO:0000313|EMBL:EJL70207.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_72_curated_158
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

167683..168132
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036B9112
Uncharacterized protein {ECO:0000313|EMBL:EJL70208.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_72_curated_159
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

168294..168878
DNA (585bp) protein (195aa)
Putative phosphoesterase, PAP2 superfamily n=1 Tax=Variovorax paradoxus B4 RepID=T1X7U1_VARPD
putative phosphoesterase, PAP2 superfamily
Putative phosphoesterase, PAP2 superfamily {ECO:0000313|EMBL:AGU48404.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_72_curated_160
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

168875..169960
DNA (1086bp) protein (362aa)
Glycosyl transferase n=1 Tax=Variovorax sp. CF313 RepID=J2JQX4_9BURK
Glycosyl transferase {ECO:0000313|EMBL:EJL70210.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative glycosyltransferase, family 2
SCNpilot_cont_300_bf_scaffold_72_curated_161
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

169957..171573
DNA (1617bp) protein (539aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase n=1 Tax=Variovorax sp. CF313 RepID=J3CF75_9BURK
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:EJL70211.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative glycosyltransferase
SCNpilot_cont_300_bf_scaffold_72_curated_162
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

171566..172429
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2SX44_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL70212.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
YdjC family protein
SCNpilot_cont_300_bf_scaffold_72_curated_163
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

172607..173410
DNA (804bp) protein (268aa)
Abortive infection protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CQP8_VARPS
hypothetical protein; K07052
Abortive infection protein {ECO:0000313|EMBL:ACS17874.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_300_bf_scaffold_72_curated_164
unknown

Not on your lists

173431..174066
DNA (636bp) protein (212aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_72_curated_165
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(174127..174735)
DNA (609bp) protein (203aa)
Flavin reductase-like domain-containing protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X8A9_VARPD
flavin reductase-like domain-containing protein
Flavin reductase-like domain-containing protein {ECO:0000313|EMBL:AGU48400.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_72_curated_166
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(174764..176332)
DNA (1569bp) protein (523aa)
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI00036B6AC1
Membrane protein {ECO:0000313|EMBL:KFI07115.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_72_curated_167
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(176557..177282)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X749_VARPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU48398.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_72_curated_168
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(177487..178791)
DNA (1305bp) protein (435aa)
Cytochrome c, mono-and diheme variants family n=1 Tax=Variovorax sp. CF313 RepID=J3CJ11_9BURK
Cytochrome c, mono-and diheme variants family {ECO:0000313|EMBL:EJL72554.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative membrane-bound alcohol dehydrogenase, cytochrome c subunit
SCNpilot_cont_300_bf_scaffold_72_curated_169
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(178788..181037)
DNA (2250bp) protein (750aa)
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase; K07303 isoquinoline 1-oxidoreductase, beta subunit [EC:1.3.99.16]
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein n=1 Tax=Variovorax sp. CF313 RepID=J2KHI8_9BURK
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein {ECO:0000313|EMBL:EJL72553.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
SCNpilot_cont_300_bf_scaffold_72_curated_170
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(181034..181537)
DNA (504bp) protein (168aa)
Putative oxidoreductase, (2Fe-2S)-binding subunit n=1 Tax=Variovorax paradoxus B4 RepID=T1XFZ0_VARPD
putative oxidoreductase, (2Fe-2S)-binding subunit
Putative oxidoreductase, (2Fe-2S)-binding subunit {ECO:0000313|EMBL:AGU51030.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_72_curated_171
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

181750..183435
DNA (1686bp) protein (562aa)
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI000360BDA0
Sulfate permease-like transporter, MFS superfamily {ECO:0000313|EMBL:EJL70216.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
sulfate transporter
SCNpilot_cont_300_bf_scaffold_72_curated_172
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(183474..185225)
DNA (1752bp) protein (584aa)
Putative uncharacterized protein id=1698265 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
hypothetical protein
Tax=GWA2_Polynucleobacter_45_21_curated
SCNpilot_cont_300_bf_scaffold_72_curated_173
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(185410..186366)
DNA (957bp) protein (319aa)
Helix-turn-helix domain-containing protein id=1274540 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
helix-turn-helix domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
SCNpilot_cont_300_bf_scaffold_72_curated_174
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

186587..187789
DNA (1203bp) protein (401aa)
Putative branched-chain amino acid binding protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWA0_9BURK
branched-chain amino acid ABC transporter substrate-binding protein
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_cont_300_bf_scaffold_72_curated_175
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

187794..188672
DNA (879bp) protein (293aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Acidovorax sp. CF316 RepID=J1EE02_9BURK
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:EJE50571.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
High-affinity branched-chain amino acid transporter permease LivH
SCNpilot_cont_300_bf_scaffold_72_curated_176
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

188669..189607
DNA (939bp) protein (313aa)
Branched-chain amino acid transport system permease protein LivM n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3Q5_9BURK
branched-chain amino acid transport system permease LivM
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_cont_300_bf_scaffold_72_curated_177
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

189600..190352
DNA (753bp) protein (251aa)
branched-chain amino acid ABC transporter ATPase n=1 Tax=Acidovorax radicis RepID=UPI000237516B
ABC transporter-like protein
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_cont_300_bf_scaffold_72_curated_178
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

190349..191062
DNA (714bp) protein (238aa)
amino acid ABC transporter ATPase n=1 Tax=Acidovorax radicis RepID=UPI000237516A
ABC transporter-like protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_cont_300_bf_scaffold_72_curated_179
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

191096..192547
DNA (1452bp) protein (484aa)
NAD-dependent aldehyde dehydrogenase n=1 Tax=Acidovorax sp. CF316 RepID=J0U373_9BURK
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:EJE50567.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
aldehyde dehydrogenase
SCNpilot_cont_300_bf_scaffold_72_curated_180
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(192566..193195)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WGJ4_DELAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD37285.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
Displaying items 151-180 of 214 in total

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