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SCNpilot_cont_300_bf_scaffold_72_curated_156

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 166217..166984

Top 3 Functional Annotations

Value Algorithm Source
short-chain dehydrogenase/reductase sdr; K00065 2-deoxy-D-gluconate 3-dehydrogenase [EC:1.1.1.125] similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 252.0
  • Bit_score: 462
  • Evalue 9.50e-128
2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI00036F9ED7 similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 254.0
  • Bit_score: 466
  • Evalue 2.10e-128
Variovorax paradoxus strain MEDvA23 contig_23, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33319.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 252.0
  • Bit_score: 464
  • Evalue 8.50e-128

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 768
ATGACGACGATGTTCGACCTCACGGGCAAGGTCGCGCTGGTCACGGGCGGCAACGGCGGCATCGGCCTGGGCATGGCGCAAGGGCTGGCAAAGGCCGGCGCGCGCGTCGTCGTGGCCGCGCGCAATGCGCAGAAGTCGGCCGCCGCGGTCGAGGCATTGAAGGCGCTGGGCAGCGACAGCTTCGCGCTGGAGGCCGACGTGAGCGACGAGGCTTCGGTGCAGCGGCTGTTCGACGAGGCCGCCGCGCGCTGCGGCCGCCTCGACATCCTCATCAACAACGCCGGCACCACGGTGCGCAAGCCCGTCGACCAGCTTGCCCTCAGCGAGTGGCACAAGGTGATGGACACCAACCTCACCAGCGCCTTCCTGTGCAGCCGCGCCGCGCATGTGCACCTGAAGGCCGCGGGCGGCGGCAAGATCATCAACATCGGCTCGATGATGTCGATCTTCGGCGCTCCCTATGCGCCTGCCTATGCCGCCAGCAAGGCCGGCATCGTGCAGCTCACCAAGTCGACCGCGCTCTCGTGGGCGCCCGACAACATCCAGGTCAACGCCATCCTGCCTGGCTGGTTCGAGACCGAACTCACCGACGGCGCGCGCAGCCAGATCCCGGGCCTGTACGAGCGCGTGACGGCTCGCGCCGCCGCAGGGCGCTGGGGCCAGCCCGCGGACATCGCCGGCACGGCCGTGTTCCTCGCGAGCGCCGCCTCGGACTACGTGACCGGCACCGCGATTCCCGTGGACGGCGGGTTTTCTATAGCCGGATAG
PROTEIN sequence
Length: 256
MTTMFDLTGKVALVTGGNGGIGLGMAQGLAKAGARVVVAARNAQKSAAAVEALKALGSDSFALEADVSDEASVQRLFDEAAARCGRLDILINNAGTTVRKPVDQLALSEWHKVMDTNLTSAFLCSRAAHVHLKAAGGGKIINIGSMMSIFGAPYAPAYAASKAGIVQLTKSTALSWAPDNIQVNAILPGWFETELTDGARSQIPGLYERVTARAAAGRWGQPADIAGTAVFLASAASDYVTGTAIPVDGGFSIAG*