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SCNpilot_cont_300_bf_scaffold_126_curated_30

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 30282..31475

Top 3 Functional Annotations

Value Algorithm Source
Putative high-affinity branched-chain amino acid ABC transporter, branched-chain amino acid-binding protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X4C3_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 397.0
  • Bit_score: 766
  • Evalue 1.50e-218
putative high-affinity branched-chain amino acid ABC transporter, branched-chain amino acid-binding protein similarity KEGG
DB: KEGG
  • Identity: 97.2
  • Coverage: 397.0
  • Bit_score: 766
  • Evalue 4.80e-219
Putative high-affinity branched-chain amino acid ABC transporter, branched-chain amino acid-binding protein {ECO:0000313|EMBL:AGU47286.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 397.0
  • Bit_score: 766
  • Evalue 2.10e-218

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1194
ATGACGAACGCTTTCAACCGCCGCCAGATCGTGAAGACCGGCGGCTCGATGATCGTGCTGGGCGCCGCGGGCGGCGTGGCCGGCATCGCATCGGCGCAGGACGGCAACACCGTGAAGCTGGGCCTGCTGCATTCGCTCTCGGGCACCATCGCCATCGCCGAGGCTTCGCTGGTCGATGCCGAAAAGCTCGCCATCGAGGAGATCAACGCGGCCGGCGGCGTGATGGGCAAGAAGATCGAAGCCGTGGTGGAAGACGGCGCGAGCGAGAACCCGGTGTTCGCCGAGAAGGCCCGCAAGCTGCTGGAGCGCGACAAGGTGGCCGCCATCATCGGCTGCTACACATCGGCCTCGCGCAAGGCGCTGCTGCCGGTGCTCAACCAGGCCAAGGGGCTGCTTTTCTACCCGACCTACTACGAGGGCCAGGAGCAGGACAAGCGCGTGTTCTACCCCTCGCAGGAGGCCACGCAGTCGGTGATCGCGGCGGTCGAGTGGATGGCGCGCGAGAAGGGCAAGAGCTTCTTCCTGGTGGGCTCCGACTACATCTACCCGCGCACCTGCAACAAGATCGCCAAGCCCGCCATCGCCAAGGCCGGCGGCAAGGTGCTCGGCGAGGAATACGCGCCGCTGGGCCACACCGAGTTCTCGTCGATCATCAACAAGATCAAGGCCGCCAAGCCCGACTGCATCTACAGCACCGTGGTGGGCGGCTCCAACGTGGCCTTCTACAAGCAGCTGCGCGCGGCGGGCCTGGACGGCGCCAAGCAGGTGCTGCTGTCCACCGTGGTGTCGGAAAACGAGATCGACGGCATCGGCAAGGACAACGCCGCGGGCTACTACGCCTGCATGGGCTACTTCCAGAGCATCAAGTCGCCGGCCAACGAGAAGTTCGTGAAAGCCTTCAAGGCTAAGTACGGGCAGGACCGCGTGATCGGCGACCCGATGGAGGTGGCCTACAACAGCGTGTACCTGTGGAAGCTGGCGGTCGAAAAAGCCAAGTCCTTCGACGTCGACAAGGTCACGGCCGCCGCCGCGGGCGTCGAGATCGAGGCGCCCGAAGGCACGGTGCGCATACACGCCACCAACCACCACGTGTGGAAGAAGGTGCGCGTGGGCCGCGCGCGGCCCGACGGGCAGTTCGACATCGTGTGGGAATCGCCCCAGCTCGTCGAGCCCAACCCCTTCCCGAAGGTCTGA
PROTEIN sequence
Length: 398
MTNAFNRRQIVKTGGSMIVLGAAGGVAGIASAQDGNTVKLGLLHSLSGTIAIAEASLVDAEKLAIEEINAAGGVMGKKIEAVVEDGASENPVFAEKARKLLERDKVAAIIGCYTSASRKALLPVLNQAKGLLFYPTYYEGQEQDKRVFYPSQEATQSVIAAVEWMAREKGKSFFLVGSDYIYPRTCNKIAKPAIAKAGGKVLGEEYAPLGHTEFSSIINKIKAAKPDCIYSTVVGGSNVAFYKQLRAAGLDGAKQVLLSTVVSENEIDGIGKDNAAGYYACMGYFQSIKSPANEKFVKAFKAKYGQDRVIGDPMEVAYNSVYLWKLAVEKAKSFDVDKVTAAAAGVEIEAPEGTVRIHATNHHVWKKVRVGRARPDGQFDIVWESPQLVEPNPFPKV*