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SCNpilot_cont_300_bf_scaffold_126_curated_31

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 31481..32383

Top 3 Functional Annotations

Value Algorithm Source
Putative high-affinity branched-chain amino acid ABC transporter, permease protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X544_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 300.0
  • Bit_score: 569
  • Evalue 1.60e-159
Variovorax paradoxus strain MEDvA23 contig_48, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28500.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 300.0
  • Bit_score: 571
  • Evalue 7.60e-160
putative high-affinity branched-chain amino acid ABC transporter, permease protein similarity KEGG
DB: KEGG
  • Identity: 97.0
  • Coverage: 300.0
  • Bit_score: 569
  • Evalue 5.00e-160

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGAACTTCGACATCGCGGTGATGCAGGTGTTCAACGGCGTGAGCCTGTTCACCATCCTGCTGCTGATGGCGATCGGGCTGGCCATCGTGTTCGGCCTGATGGGCGTCATCAACATGGCGCACGGCGAGCTGATGGCCCTGGGCGCCTACATGACCTACCTGGCCGCGCGCTTCTTCGAGCACTTCGCGCCGGGCTTCATGGACCTGTACCTGTTCGCCGCGATTCCGTTCGCGTTCGCGGTGACCTTCGCGTTCGGCTACGTGCTGGAGCGCGGCTTCATCCGCTTCTTCTACGACCGGCCGCTGGACACCCTGCTCGCCACCTGGGGCCTGAGCCTGATGCTGCAGCAGGCCTACCGCTCGATCTTCGGCGCGCAGGAAGTGAGCGTGCCGCTGGCCTCCTGGCTCGCGGGCGCGTGGGAGCCGACGGCGGGCATCCAGCTGCCGCTGAACCGCATCTTCATCGTGGGGCTCACCGCGCTGGTGGCCACCGGCGTGTACCTGCTGCTGTACCGCACTTCGTGGGGACTCAAGGTGCGCGCGGTGACGCAGAACCGCGCGATCGCCGGCGCGGTGGGCATCGACACGCACCGCGTCGACGCCATGACCTTCGCGCTGGGCTCGGGCCTCGCGGGCATCGCGGGCGCGGTGTTCACCATGATCGGCTCGACCAACCCCGGCACGGGGCAGCTCTACATCGTCGATTCGTTCATCGTGGTGGTGTTCGGCGGCGTGCAGAGCCTGGTGGGCACGGCCCTCTCGGGCTTTTCCATCGCGCAGTCGCAGACCTGGCTGGAGTACCTGATGAGCGGCTCGATGGCCAAGGCGACGATCCTGCTGCTGGTGATCGTGGTGCTGTACTTCCGCCCCAACGGGCTGTTCGCCACGCGTTCGAGGAGCTGA
PROTEIN sequence
Length: 301
MNFDIAVMQVFNGVSLFTILLLMAIGLAIVFGLMGVINMAHGELMALGAYMTYLAARFFEHFAPGFMDLYLFAAIPFAFAVTFAFGYVLERGFIRFFYDRPLDTLLATWGLSLMLQQAYRSIFGAQEVSVPLASWLAGAWEPTAGIQLPLNRIFIVGLTALVATGVYLLLYRTSWGLKVRAVTQNRAIAGAVGIDTHRVDAMTFALGSGLAGIAGAVFTMIGSTNPGTGQLYIVDSFIVVVFGGVQSLVGTALSGFSIAQSQTWLEYLMSGSMAKATILLLVIVVLYFRPNGLFATRSRS*