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SCNpilot_cont_300_bf_scaffold_224_curated_25

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(32409..35129)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion ATPase, ClpV1 family n=1 Tax=Variovorax sp. CF313 RepID=J2K8U0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 917.0
  • Bit_score: 1641
  • Evalue 0.0
Type VI secretion ATPase, ClpV1 family {ECO:0000313|EMBL:EJL76660.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 917.0
  • Bit_score: 1641
  • Evalue 0.0
type VI secretion ATPase, clpv1 family; K11907 type VI secretion system protein VasG similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 912.0
  • Bit_score: 1621
  • Evalue 0.0

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2721
ATGACAGACATCCGACGCGTCTCGCTTTTCTCCAAGCTCAACCCGATGCTCTACAAGGCATTGGAAACCGCCACCGCCTTCGCCAAGCTGCGCGGCAATGCCTATGTGGAGCTGGTGCACTGGCTGCACCAGATCCTGCAGCTGCAGGACAGCGACATGCTGCGCATCATCAAGCGCGCCGGCCTGAACCTCGACGCGGTAGAGAACGACCTGGTGCGCGCGCTCGACCGGCTGCCGCACGGCGCCACCTCGATCAGCGACATCTCCGAGCATGTGGACAACGCCGTGGAGCGCGCCTGGGTGTATGCCAGCCTGCGCTTCGAGGCCACTTCGATCCGTGGTGCCTACCTGCTCGCGGGCATCATCAAGACGCCGGGGCTGCGGCAGGTGCTGTCGGGCATTTCGCGCGAGTTCGACAAGATCGTGCCCGACGTGCTGGTGGCGCAGCTCGCGGCCTGGACCGAAGGCTCGCCCGAGGACGACCATGACGTGGCCGCCGCGCCGGGCGTGCCAGCCGTCGCGTCGGCGAATGCGCACCAGGGCGATGGCGCGCCGGCCGGCGGCTCCGCGCTGGCCAAGTACGCGAGCGACCTCACGGCCAAGGCGCGCGCGGGCGAACTCGATCCGGTGTACGGCCGCGACGACGAAATCCGCCAGATCATCGACATCCTCATGCGGCGCCGCCAGAACAACCCGCTGCTGACCGGCGAGGCCGGCGTCGGCAAGACGGCGGTGGTCGAGGGCCTGGCCTCGCGCCTTGCCGCGGGCGACGTGCCGCCTTCGCTGAAGGACGTGTCGCTGTGGGTGCTCGACCCCACGCTGCTGCAGGCCGGCGCGGGCGTGAAGGGCGAGTTCGAGCAGCGGCTGCGGCAGGTGATCGACGAGGTCGAGAAGAGCCCGAAGCCCATCGTGCTGTTCGTCGATGAAGTGCACACGCTGGTGGGCGCGGGCGGTACGGCAGGCACGGGCGACGCGGCCAACCTGCTCAAGCCGGCGCTCGCGCGCGGACGGCTGCGCACCATCGGCGCGACCACCTGGTCGGAGTACAAGAAATACATCGAGAAAGACCCGGCGCTCACGCGGCGCTTCCAGACCATCCAGGTGCACGAGCCCACCGAGCCGAAGGCGGTGGTGATGCTGCGCGGCATCTCGGCGGAGCTGGAGAAGCACCACGGCGTGCTCATCCTCGACGCCGCGCTCGAGGCGGCAGTGAGCCTGTCGCACCGCTACATTCCAGCGCGCCAGCTGCCCGACAAGGCCGTGAGCCTGCTCGACACCGCCTGTGCACGGGTGGCCCTGAGCCAGCATGCGCTGCCCGCCGCCATCGAAGACCTGCAACGCCGCATCGAGGTGCTGGGCATCGAGTCGGGCATCGCCGGGCGTGAGGCCGCCATCGGCGTGGGTGAACATCAACGCGTGGAAGACATCGCCGCCCAGGTGGCAGAGGCACAGGCGGAGCTCGAACTGCTGGAAACGCGGCGCGTGGAAGAAAGCGCGCTGGTCGAGCGCATCGTGGCGCTGCGCAAGCAGCTCTCGCCGGCAGCGGTGCCTCAGGCAGGGGCTGACGACGATGCAAAGAGCCAGGATGCGCAGGCATCGGATACCGATCCCGCGAAGACCGCGGAAGAGATTCGCGCCGAACTCGCCCAGGCGCAAGACAGGCTCGTGCAGCTGCAAGGCGAGTCGCCGCTCATCCTCGCGGCCGTCGACGCGCAGGCCATCGCCACCGTGGTGGCCGACTGGACCGGCATTCCCATCGGCCGCATGGTGCGCGACGATGCGCAGTCGGTGCTCAAGCTCGGCGAGATCCTCTCGGCCCGCGTGGTCGCGCAGCCCGATGCGCTGGAGACCATCTCGCGGCGCATCCGCACGGCCCGTGCGCGGCTGGACAACCCCAACAAGCCCGTCGGCGTGTTCCTGCTGTGCGGCCCCTCCGGCGTGGGCAAGACAGAGACAGCGCTCGCGCTGTCGGAGGCGCTGTACGGCGGCGAGCAGAACCTCGTCACCATCAACATGAGCGAGTTCCAGGAGTCGCACACCGTCTCCACGCTCAAGGGCGCGCCGCCCGGCTACGTGGGTTACGGCGAAGGCGGCGTGCTCACCGAAGCCGTGCGCCGCAGGCCCTACAGCGTGGTGCTGCTCGACGAGATCGAGAAGGCGCACACCGACGTGCACGAGATCTTCTTCCAGGTCTTCGACAAGGGCTGGATGGAAGACGGCGAAGGCCGCCACATCGACTTTCGCAACACCGTGATCATCATGACCTCCAACGTCGGCACCGACCTGGTCATGCAGCTGTGCGAGGACCCGGACCTGCGGCCAGACCCCGAGCCGCTCGCCAATGCGCTGCGCGAGCCGCTGCTCAAAGTGTTCGCGCCCGCGCTGCTCGGTCGGCTGGTCGTGGTGCCCTACTACCCGCTGCATGCGCAGGCACTGCACCGCATCATCCGGCTGCAGCTGGACCGCATCGCCGCGCGCCTGGCGGCCAACCACGGCATTACATTGGTTTACGACGACAGCGCGGTCGAACTGGTCGCGCGCCGCTGTACTGCCATAGAGTCGGGTGGCCGGATGATCGACGCGATCCTCACGCACACGATCCTTCCGCGCCTGAGCGAGGAAGTCATCGGCGCCACGGTCAGTGCGCGCAAGCTCGCCGGCGTGCGGCTGAGCGCGGAAGGAGACGACTTCCACTACGAATTTTCCGAAGCCGAACGCTGA
PROTEIN sequence
Length: 907
MTDIRRVSLFSKLNPMLYKALETATAFAKLRGNAYVELVHWLHQILQLQDSDMLRIIKRAGLNLDAVENDLVRALDRLPHGATSISDISEHVDNAVERAWVYASLRFEATSIRGAYLLAGIIKTPGLRQVLSGISREFDKIVPDVLVAQLAAWTEGSPEDDHDVAAAPGVPAVASANAHQGDGAPAGGSALAKYASDLTAKARAGELDPVYGRDDEIRQIIDILMRRRQNNPLLTGEAGVGKTAVVEGLASRLAAGDVPPSLKDVSLWVLDPTLLQAGAGVKGEFEQRLRQVIDEVEKSPKPIVLFVDEVHTLVGAGGTAGTGDAANLLKPALARGRLRTIGATTWSEYKKYIEKDPALTRRFQTIQVHEPTEPKAVVMLRGISAELEKHHGVLILDAALEAAVSLSHRYIPARQLPDKAVSLLDTACARVALSQHALPAAIEDLQRRIEVLGIESGIAGREAAIGVGEHQRVEDIAAQVAEAQAELELLETRRVEESALVERIVALRKQLSPAAVPQAGADDDAKSQDAQASDTDPAKTAEEIRAELAQAQDRLVQLQGESPLILAAVDAQAIATVVADWTGIPIGRMVRDDAQSVLKLGEILSARVVAQPDALETISRRIRTARARLDNPNKPVGVFLLCGPSGVGKTETALALSEALYGGEQNLVTINMSEFQESHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHTDVHEIFFQVFDKGWMEDGEGRHIDFRNTVIIMTSNVGTDLVMQLCEDPDLRPDPEPLANALREPLLKVFAPALLGRLVVVPYYPLHAQALHRIIRLQLDRIAARLAANHGITLVYDDSAVELVARRCTAIESGGRMIDAILTHTILPRLSEEVIGATVSARKLAGVRLSAEGDDFHYEFSEAER*