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SCNpilot_cont_300_bf_scaffold_224_curated_29

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(38715..39578)

Top 3 Functional Annotations

Value Algorithm Source
Protein of avirulence locus involved in temperature-dependent protein secretion n=1 Tax=Variovorax sp. CF313 RepID=J3CQU9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 287.0
  • Bit_score: 530
  • Evalue 1.30e-147
Protein of avirulence locus involved in temperature-dependent protein secretion {ECO:0000313|EMBL:EJL76664.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 287.0
  • Bit_score: 530
  • Evalue 1.90e-147
ImpE domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 287.0
  • Bit_score: 483
  • Evalue 5.80e-134

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 864
ATGGGCGATGGGTTTGCAGTGCTTGGCGAACGCTCCGTGGCCGAGCACACCGAATGGGTACAGCGGCAGATCCGCGCCAATCCCCAGAACGCCAGCCTGAGGCTCGCCCTGTGCCACTTTCTCGCGCTGCGCGGTGAGTGGCAACGGGCCGAAGACCAGCTCAAGCTCGCGACCAAGCTCGATCCCACGTTCACGCCCGCCAGCGTCACCTGCTCGATGGCGCTCGCTGGGGAGCGCCATCGCGCCGAATTCTGGGCCGGCGGACGCGCGCCGGCCATCGTCGGCGGCAACGCGGAATGGGTCGAGCAGCTCGTTGCCGCCGCCGCGCTGCCAGCCGGCCGTGCCGAAGAAGCCGCGGCGCTGCGCGAGACCGCGCGGCAGGCGGCGCCCGCATTACGCGGAGCGCTCACCGGCGTAGACCGCTCCGACGCACGCGCAGTGCAGGCGCTCGACGGCGAGCCGGTGCAGCGCAGCGACTTCGAATGGCTCTGCGACGGCGATGTGCGCATCGGCCCGGTGCTGGAGCTGCTTACTCCTTCGGGCTACGCATGGCTGCCGTTGCCGGAAGTGCGCCGCATCAAGTTCTCGCGCCCCCAGCATCTGGTCGACCTGCTGTGGGCGCCCGCCGAGATCGAGCTGCACGACGGCCGCGCACTCAACGGGCTGGTGCCCGTGCGCTACCCGGGCAGCCTCGAAGGACTCGACGACGAAACCACGCTGGGCCGCCGCACCGACTGGCTGCCGCTGCCTGGCGAAGAACAATATGCGGGCGTCGGCCAGCGCACGCTGATCAGCGAGGCTGGCAACCATTCGCTGCTCGACCTGCGGCTGATCGAGATCACGCCCGAGGGCGCCGCCGCATGA
PROTEIN sequence
Length: 288
MGDGFAVLGERSVAEHTEWVQRQIRANPQNASLRLALCHFLALRGEWQRAEDQLKLATKLDPTFTPASVTCSMALAGERHRAEFWAGGRAPAIVGGNAEWVEQLVAAAALPAGRAEEAAALRETARQAAPALRGALTGVDRSDARAVQALDGEPVQRSDFEWLCDGDVRIGPVLELLTPSGYAWLPLPEVRRIKFSRPQHLVDLLWAPAEIELHDGRALNGLVPVRYPGSLEGLDDETTLGRRTDWLPLPGEEQYAGVGQRTLISEAGNHSLLDLRLIEITPEGAAA*