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SCNpilot_cont_300_bf_scaffold_224_curated_31

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(40208..41716)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein, EvpB/VC_A0108 family n=1 Tax=Variovorax sp. CF313 RepID=J3CRB8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 502.0
  • Bit_score: 1006
  • Evalue 8.40e-291
Type VI secretion protein, EvpB/VC_A0108 family {ECO:0000313|EMBL:EJL76666.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 502.0
  • Bit_score: 1006
  • Evalue 1.20e-290
type VI secretion protein, EvpB/VC_A0108 family similarity KEGG
DB: KEGG
  • Identity: 96.6
  • Coverage: 502.0
  • Bit_score: 988
  • Evalue 9.80e-286

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1509
ATGAGTACCGCATCCAACCAAGGCGCCGCGCGCGCGCAGGCCACCGTCGAGGCGCTGGAGCCGAACGAGTTCTCCAACCTGCTGCAGCGCGAGTTCAAGCCCAAGACCGACCAGGCCCGCGAGGCGGTGGAGAACGCCGTCAAGACGCTGGCCGTGCAGGCGCTGGAGAACACGGTCACCATCTCCAACGATGCCTACCGCTCGGTGCAGGCCATCATCACCGAGATCGACCGCAAGCTCTCCGAACAAATCAACCAGATCCTGCACCACGAAGAGTTCCAGCAGCTCGAAGGCGCATGGCGCGGCCTGCACTACCTCGTGAACAACACCGAGACCGACGAGCAGCTCAAGATCCGCGTGATGTGCGCGTCGAAGCGCGAAGTGGCGCGCTCGCTCAAGCGCCACAAGGGCATCGGCTGGGACCAGAGCCCGCTGTTCAAGAAGATCTACGAGGCCGAGTACGGCCAGTTCGGCGGCGAGCCCTTCGGCGCGCTCATTGGCGACTTCCACTTCGACCACAGCCCGCCCGACGTCGAGATGCTCGGCGAAATGGCCAAGATCGCCGCCGCCGCGCACTGCCCCTTCATTGCCGGCGCGTCGCCCACCGTGATGCAGATGGACTCGTGGCAGGAGCTGTCGAACCCGCGGGACCTGACCAAGATCTTCCAGAACACCGAGCACACCGCATGGCGCTCGCTGCGCGACTCGGAAGACGCGCGCTACATCGGCCTGGCCATGCCGCGTTTCCTGGCCCGCCTGCCGTATGGCGCGCGCACCAACCCGGTCGACGAATTCGAATTCGAGGAAGAAACCGACTCGGCCGCGCACAACCGCTACACCTGGGCCAACTCGGCCTATGCGATGGGCGTGAACATCAACCGCTCGTTCAAGCAGTACGGCTGGTGCACGTCCATTCGCGGCGTGGAGTCTGGCGGCGCGGTCGAGAACCTGCCCACCCACACCTTCCCGACCGACGACGGCGGCGTCGACATGAAGTGTCCGACCGAGATCGCCATCAGCGACCGGCGCGAGGCCGAACTCGCCAAGAACGGCTTCATGCCGCTGGTGCACCGCAAGAACTCCGACTTCGCGGCCTTCATCGGCGCGCAGTCGCTGCAGCTGCCGGCCGAGTACTACGACGCCGACGCCACGGCCAACGCGAACCTCGCGGCGCGCCTGCCGTACCTGTTCGCTTGCTGCCGCTTCGCGCACTACCTGAAGTGCATCGTGCGCGACAAGATCGGTTCGTTCCGCGAGCGCGAGGACATGGAGCGCTGGCTCAACGACTGGATCATGAACTACGTCGACGGCAGCCCCGGCACCTCGTCGCAGGATACGAAGGCAATGAAGCCGCTGGCGGCGGCCGAAGTCCAGGTGGAAGCCATCGAGGACAACCCCGGCTACTACGCCGCCAAGTTTTTTCTCCGGCCGCACTATCAGCTCGAAGGGCTGACGGTGTCGTTGCGGCTGGTTTCGAAGCTGCCATCCAACAAGAAGGACAGCAGCTAA
PROTEIN sequence
Length: 503
MSTASNQGAARAQATVEALEPNEFSNLLQREFKPKTDQAREAVENAVKTLAVQALENTVTISNDAYRSVQAIITEIDRKLSEQINQILHHEEFQQLEGAWRGLHYLVNNTETDEQLKIRVMCASKREVARSLKRHKGIGWDQSPLFKKIYEAEYGQFGGEPFGALIGDFHFDHSPPDVEMLGEMAKIAAAAHCPFIAGASPTVMQMDSWQELSNPRDLTKIFQNTEHTAWRSLRDSEDARYIGLAMPRFLARLPYGARTNPVDEFEFEEETDSAAHNRYTWANSAYAMGVNINRSFKQYGWCTSIRGVESGGAVENLPTHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFMPLVHRKNSDFAAFIGAQSLQLPAEYYDADATANANLAARLPYLFACCRFAHYLKCIVRDKIGSFREREDMERWLNDWIMNYVDGSPGTSSQDTKAMKPLAAAEVQVEAIEDNPGYYAAKFFLRPHYQLEGLTVSLRLVSKLPSNKKDSS*