ggKbase home page

SCNpilot_cont_300_bf_scaffold_224_curated_32

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(41741..42313)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein, VC_A0107 family n=1 Tax=Variovorax sp. CF313 RepID=J2TEE9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 190.0
  • Bit_score: 358
  • Evalue 6.00e-96
Type VI secretion protein, VC_A0107 family {ECO:0000313|EMBL:EJL76667.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 190.0
  • Bit_score: 358
  • Evalue 8.40e-96
type VI secretion protein, VC_A0107 family similarity KEGG
DB: KEGG
  • Identity: 94.7
  • Coverage: 190.0
  • Bit_score: 349
  • Evalue 6.70e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGGCAGACAACCGTGTCAGGAACAGTGGTCAGAAATTCATCGCGCGCAACCGCGCGCCGCGTGTGCAGATCGAGTACGACGTGGAAATCTACGGCAGCGAACGAAAGATCCAGCTGCCCTTCGTGATGGGCGTCATTGCCGATCTCGCGGGCAAGCAGGTCGATCCGATGCCCGACCTCGCCGAGCGCGAGTTCATGGCGGTGGACATCGACAACTTCGACGAGCGCATGAAATCCATCAAGCCGCGCGTTGCCTTCCAGGTGCCCAACACGCTCACCGGCGACGGCCAGATGAACGTCGACATCACCTTCGACAGCATGGACGACTTCTCCCCCGCGCGCATCGCACGCCAGGTGGACGCGCTGCAGCAGCTGCTCGAAGCCCGCACCGAGCTGTCGAACCTGCTGTCGTACATGGACGGCAAGAACGGCGCCGAGCAGCTCATCGCGCAGGCGCTGCAGAACCCGGCGCTGCTGAAGTCGCTGGCTTCCGCGCCCAACCCCGCGGTGGCCAAGGCCGTGGAAGCGGCCAATGAAAAGGCCGGCACCGCGCCCGGCACCTCTTCCGAATAA
PROTEIN sequence
Length: 191
MADNRVRNSGQKFIARNRAPRVQIEYDVEIYGSERKIQLPFVMGVIADLAGKQVDPMPDLAEREFMAVDIDNFDERMKSIKPRVAFQVPNTLTGDGQMNVDITFDSMDDFSPARIARQVDALQQLLEARTELSNLLSYMDGKNGAEQLIAQALQNPALLKSLASAPNPAVAKAVEAANEKAGTAPGTSSE*