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SCNpilot_cont_300_bf_scaffold_224_curated_33

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(42401..43492)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion-associated protein, ImpA family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5U8_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 362.0
  • Bit_score: 584
  • Evalue 7.50e-164
ImpA family type VI secretion-associated protein; K11902 type VI secretion system protein ImpA similarity KEGG
DB: KEGG
  • Identity: 82.0
  • Coverage: 362.0
  • Bit_score: 584
  • Evalue 2.40e-164
Type VI secretion-associated protein, ImpA family {ECO:0000313|EMBL:ADU37089.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 362.0
  • Bit_score: 584
  • Evalue 1.10e-163

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1092
ATGAGGTTGTCGCCAAGCGAGATCGAACTATTGCAGTCGCCTGTGGAAGGCCCGCATCCGTGCGGCGAAGATCTGGAGTACGACCCCGATTTCATGGCGTTGCAACAGGCAACGACGGGCAAGCGCGAGCAACAGTTCGGCACCACCATCATTCCCGCCGAGCCGCCCGACTGGGCACGCGTGGAGCGCATCGCGAAGCAGTTGTGCTCGCGCACACGAGACCTTCGCGTGCTGGTGCCGCTCACGCTGGCCTGGACCGAGAACCGTGGGCTTCCTGGTTATGTCGAAGGCCTGCAGCTCGTCGATGCGGTGCTGCAGAAATTCTGGGACGACGTGCATCCGCGCGTGACCGAGGACGGCTTCGAAGACCCGCTGCCGCGCATGAACGCATTGGCGGCGCTGGCCGAAGCCGAAGGGCTCGGGCGTAGCGTTCGCGATGCACGGCTGCTCGACGACGGCGGCGCATCCATGACCTTGCGGCAGGTCGAGGCACTGCTCGATTCGAGCAAGACCGACCAGATCGATTACCCCGGCGGCATCGGCCGGTTGCGCGACGCGGCACGCCGCGCACAGGAGAAGGCAGCCGCGCCCGTGGTCGCGTTGCGCGAAGCGCTCGAGCTGCTGCAGCGCATTCGCGAGACTTCCGAACGCGCGCTCGGCCAGAGCTGGGCGCCCGACTTCTCGCGGCTCGAAAGATCGCTTCGCACCGTGGTCCAGCTGCTGCCGGAGCAGTCGCAGACAGATCAGGCAGAAGCCGTTCCACCGCACTCCCCGGTGGGTTCGGATGACAACGCACAGTTGCCGTCGGCCGCGAACGGTACTGCCGAAAGTGTCGGCATGGGACTACGCGCCGCTCGCGTCAAAGACATTGAAATATCGAGCCGTGATGATGTGCAAGTGCTGTTGGAGAAAGCCTGCCAGTACCTGGAGCGGACGGAGCCGAGTCATCCGTCGCCCATGCTGATACGCCGCGCGCAGCGGCTGCTGGATCTCAACTTCTTCCAGATCATCGAAGAACTCGTACCCGAGGGATTGCAAAAGATAGAGAGCCTTGCGGGCCGGCCGCTGAACGGCGGGAGCGGAACGCAGTAA
PROTEIN sequence
Length: 364
MRLSPSEIELLQSPVEGPHPCGEDLEYDPDFMALQQATTGKREQQFGTTIIPAEPPDWARVERIAKQLCSRTRDLRVLVPLTLAWTENRGLPGYVEGLQLVDAVLQKFWDDVHPRVTEDGFEDPLPRMNALAALAEAEGLGRSVRDARLLDDGGASMTLRQVEALLDSSKTDQIDYPGGIGRLRDAARRAQEKAAAPVVALREALELLQRIRETSERALGQSWAPDFSRLERSLRTVVQLLPEQSQTDQAEAVPPHSPVGSDDNAQLPSAANGTAESVGMGLRAARVKDIEISSRDDVQVLLEKACQYLERTEPSHPSPMLIRRAQRLLDLNFFQIIEELVPEGLQKIESLAGRPLNGGSGTQ*