ggKbase home page

SCNpilot_cont_300_bf_scaffold_1121_curated_9

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(6875..7747)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Amorphus coralli RepID=UPI00035DF61D similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 290.0
  • Bit_score: 311
  • Evalue 1.30e-81
ABC transporter permease {ECO:0000313|EMBL:KEJ93894.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter pseudonitzschiae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.0
  • Coverage: 284.0
  • Bit_score: 347
  • Evalue 1.30e-92
high-affinity branched-chain amino acid transport system, permease protein similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 290.0
  • Bit_score: 309
  • Evalue 1.50e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfitobacter pseudonitzschiae → Sulfitobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 873
ATGACCGAATTCCTGCAGTTTGCACTTGCCGGCATTTCCGTTGGCGTCATCTATGGCGCCATCGCAGTCGGCTTCAACATCATCTACAACTCTTCGCATGTGGTGAATTTCGCCCAAGGCGAATTCGTCATGCTAGGCGCGATGACGTGTGTCCTGCTGCTCGGTGCAGGCCTTCCCTACCCGCTCGCCGCGTTCCTTGCCGTGGCGGCCACGGCCGTCGTCGGGCTATTGCTGTATGACGTTGCCATCCGACCTGCGAAGAATGCGCCGGTGATCATGCTGATCATCATCACGATCGGCGCATCCATTCTGATACGCGGCCTCGCCCGGCCGATCTTCGGTACGGGCGTCGCCTCGCTGCCTGCCGTCGTGCCAGGTGCCTCCATCTCGATCGGGGGCGCGGTCGTGCAACCCCAGAGCCTCATCGTGGTCGCTGGTACTTTGGGTGCAGTTCTATTGCTGTGGCTGTTCATGAGGAAGACGCTGCTGGGGAAGGGGTTGATCGCTGCTTCCTCCGATCCCATGGCTGCGACGCTGATGGGCATCCGGGTCAGCAACATCGTGCGACTCAGCTTTTTAATCTCGGCTTCGCTCGGGGCCGTGTCCGGCATCCTGATCGCGCCCATTGCTCTTGCCAACTACGAGATGGGCACGCTGCTCGCATTGAAAGGCTTTGCGGCCGCGATCCTCGGTGGCATGGGAAGCATCCCTGGTGCCGTGCTTGGCGGGCTTCTGGTCGGACTCAGCGAGGCAATGTCCGCCGGCTATATCTCCTCCGACTACAAGGATGCCACTGCCTTTGTGGTCATCATGCTGGCCCTGTTCTTCTTCCCGAATGGCCTGGTCGGTTCGGGAGAGGTGACTCGTGCGTAG
PROTEIN sequence
Length: 291
MTEFLQFALAGISVGVIYGAIAVGFNIIYNSSHVVNFAQGEFVMLGAMTCVLLLGAGLPYPLAAFLAVAATAVVGLLLYDVAIRPAKNAPVIMLIIITIGASILIRGLARPIFGTGVASLPAVVPGASISIGGAVVQPQSLIVVAGTLGAVLLLWLFMRKTLLGKGLIAASSDPMAATLMGIRVSNIVRLSFLISASLGAVSGILIAPIALANYEMGTLLALKGFAAAILGGMGSIPGAVLGGLLVGLSEAMSAGYISSDYKDATAFVVIMLALFFFPNGLVGSGEVTRA*