ggKbase home page

SCNpilot_cont_300_bf_scaffold_1121_curated_10

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(7779..8918)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDQ1_XANP2 similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 370.0
  • Bit_score: 439
  • Evalue 4.10e-120
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEJ93893.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter pseudonitzschiae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 379.0
  • Bit_score: 471
  • Evalue 1.00e-129
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 370.0
  • Bit_score: 439
  • Evalue 1.30e-120

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfitobacter pseudonitzschiae → Sulfitobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1140
GTGAAAACCATGAAGTTGCTTTTGGCAAGCCTGCTTGCGCTGGCAATCCATCCCGTGTACGCCGCCGATCCGATCAAGATCGGCGCCGTCATCTCGAGAACGGGGCCGGCGGCCTTCCTTGGCGAGCCGCAGGAGATCACGCTCAAACACTACGTCGGCGAGATCAACAAGTCGGGTGGCGTGCTCGGCCGCCCGCTCGAACTCGTAATCTACGACGACACCTCCGATGCAAACACCACGCGCACTTTCGCCACCCGGCTGATCGAAGAAGATAAAGTGGTTGCGGCGATGGGTGCCAGCACGACCGGCGGAACCCTGGCCATCGCGCCGGTCTTCGACGAAGCGAAGGTGCCACTGATTTCCCTGGCCGCCGGAATCGAGATCGTCCAGCCCGTTCGGCCGTTCGTCTTCAAGACGCCGCACGACGACCGGATGGTTTGCTCGGCCATCGCATTGGACATGAAGGCGCGGGGCTACAAGAACATCGCTTTGATGACCGGAACCGATGGCGTGGGCAAGTCCATGCGCAAGGAATGTACGGCCGCGGCGGCAGCGCAGGGAATCAAGGTGATTGCCGATGAGAACTTCAACGCGAAGGACATCGACATGACTCCGCAGCTGACCAAGATCAAGAACACCAAGGGTGTCGATGCGGTTTTCGTCGGCGGATTCGGGCAGCCGCTCGCGGTCGTCACGCGCAACTATGGACAACTGGGCCTGCCCTTCCCGCAGTACCACGCGAACGGATCGGCTTCCAAGGAATACATCCAGATGGCGGGCCCCGCGAGCGAGCGCGTTCGCCTGCCTGGACCTCTCCTGGTCGTCGCAGACAAGCTCGGCCCGAATGATCCTGCGCGAGCTGTTCCGGTGGCCTACGCCGCCACGTACAAGAAGGTGAGCGGCAAGGACGCTTCCTCGTTCGGCGGCTACAGCTACGACGCGCTGATGCTCATCGTGAACGCCATCAAGCGCGCCGGCTCCAGCAATCCCGCGGCCATCCGGAACGCGTTGGAAACGACCAAAAACTACATGGGCGTCACCGGCACGTACAACCTGAGCCCGACGGATCACAACGGTCTGGACCGAAGCTCGCTGTACATGGTCGACATCAAGAACGGCGACTGGTCTCTCAAACAATAA
PROTEIN sequence
Length: 380
VKTMKLLLASLLALAIHPVYAADPIKIGAVISRTGPAAFLGEPQEITLKHYVGEINKSGGVLGRPLELVIYDDTSDANTTRTFATRLIEEDKVVAAMGASTTGGTLAIAPVFDEAKVPLISLAAGIEIVQPVRPFVFKTPHDDRMVCSAIALDMKARGYKNIALMTGTDGVGKSMRKECTAAAAAQGIKVIADENFNAKDIDMTPQLTKIKNTKGVDAVFVGGFGQPLAVVTRNYGQLGLPFPQYHANGSASKEYIQMAGPASERVRLPGPLLVVADKLGPNDPARAVPVAYAATYKKVSGKDASSFGGYSYDALMLIVNAIKRAGSSNPAAIRNALETTKNYMGVTGTYNLSPTDHNGLDRSSLYMVDIKNGDWSLKQ*