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SCNpilot_cont_300_bf_scaffold_250_curated_74

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(87055..88143)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] similarity KEGG
DB: KEGG
  • Identity: 98.3
  • Coverage: 362.0
  • Bit_score: 697
  • Evalue 1.90e-198
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 362.0
  • Bit_score: 697
  • Evalue 8.50e-198
3-isopropylmalate dehydrogenase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3J6_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 362.0
  • Bit_score: 697
  • Evalue 6.10e-198

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1089
ATGAAAATCGCAGTTCTTCCGGGTGACGGCATCGGCACCGAAATCGTGGCCGAAGCGGTCAAGGTGCTCAACGTGCTCGACCTGAAGTTCGAGATGGAATCGGCGCTGGTCGGCGGCGCGGCCTACGAGGCGCACGGCCACCCGCTGCCCGAGTCGACGCTCAAGCTGGCCAAGGAATCCGACGCGGTGCTGTTCGGCGCCGTCGGCGACTGGAAGTACGACAAGCTCGACCGGCCGCTGCGCCCCGAGCAGGCCATCCTGGGGCTGCGCAAGAACCTGGGCCTGTTTGCGAACTTCCGCCCGGCCATCTGCTACGAGCAGCTGGTGGACGCATCGAGCCTGAAGCCCGAGCTGATCGCCGGCCTCGACATCCTCATCATCCGCGAGCTGACCGGCGACATCTATTTCGGCCAGCCGCGTGGCCGTCGCATCGCGACGGACGGGCACTTCCCCGGCGCCGAAGAGGCTTTCGACACGATGCGCTATTCGCGCCCCGAGATCGAGCGCATCGCCCGCGTCGCCTTCGAGGCCGCCCGCAAGCGCAGCAAGCGCGTGACCAGCGTGGACAAGAACAACGTGCTGGAAACCTCGCAGCTGTGGAAAGACGTGATGCTCGACATCGCGAAGGAATATCCGGATGTCGAACTCGACCACATGCTGGTCGACAACGCGGCCATGCAGCTCGTGAAGGCGCCCAAGAAGTTCGACGTGGTGGTCACTGGCAACATGTTCGGCGACATCCTCTCGGACGAGGCCGCGATGCTCACCGGCTCCATCGGCATGCTGCCCTCGGCCTCGCTCAATTCGAGCAACCAGGGCCTGTACGAGCCCAGCCACGGCAGCGCGCCCGACATTGCCGGCAAAGGGGTTGCCAATCCTTTGGCTACAATACTGTCCGCTGCCATGATGCTCCGCTTCTCACTCAACCAAGCCGAGGCTGCCGACCGTATCGAGTCGGCGGTCAAGGACGTGCTGGCCTCCGGGCTGCGCACGGGTGACATCTGGTCAGAAGGTACGAAGCGCGTCGGCACCCGCGAAATGGGCGACGCGGTCGTTGCAGCAATCACCAAAAAGACGATTACCGGCTAA
PROTEIN sequence
Length: 363
MKIAVLPGDGIGTEIVAEAVKVLNVLDLKFEMESALVGGAAYEAHGHPLPESTLKLAKESDAVLFGAVGDWKYDKLDRPLRPEQAILGLRKNLGLFANFRPAICYEQLVDASSLKPELIAGLDILIIRELTGDIYFGQPRGRRIATDGHFPGAEEAFDTMRYSRPEIERIARVAFEAARKRSKRVTSVDKNNVLETSQLWKDVMLDIAKEYPDVELDHMLVDNAAMQLVKAPKKFDVVVTGNMFGDILSDEAAMLTGSIGMLPSASLNSSNQGLYEPSHGSAPDIAGKGVANPLATILSAAMMLRFSLNQAEAADRIESAVKDVLASGLRTGDIWSEGTKRVGTREMGDAVVAAITKKTITG*