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SCNpilot_cont_300_bf_scaffold_214_curated_55

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(91097..91690)

Top 3 Functional Annotations

Value Algorithm Source
signal peptide protein n=1 Tax=Variovorax paradoxus RepID=UPI00035EA739 similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 197.0
  • Bit_score: 354
  • Evalue 9.00e-95
Variovorax paradoxus strain MEDvA23 contig_29, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ31892.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 197.0
  • Bit_score: 353
  • Evalue 2.10e-94
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 84.8
  • Coverage: 197.0
  • Bit_score: 349
  • Evalue 9.10e-94

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
GTGCTGCTGTGGGCCTGGGTCGTGTGGATGGCGTGGCTGCCGGTGCCGGCCGCCGCCCAGGGGCGCCCCGGCGCGTCCATCAGCCAGATGCGGCTGGAGCAGGCCGACGACGGCGTCTACCTGAGCGCGTCCGTGCAGTTCGAGCTGCCCTCGCTGGTCGAGGAGGTGCTCGACAAGGGCATCGCCATCTATTTCGTGGCCGAGGCTGAGCTCTTCCAGGAGCGCTGGTACTGGACCGACCGCAAGGTCGCGCAGGTCCAGCGTCACATGCGGCTGGCCTACCAGCCGCTCACCCGGCGCTGGCGACTCAATGTTTCGCCGGTGCCGATCACCGGTGCCGCCGGCCTCGGCATTTCGCTGAACCAGAACTTCGACACCCTGAGCGATGCGCTCGACGCCATCAAGCGCGTCGGGCGGATGCGGCTGGGCGACGTGGCCGAGATCGGCGACGACCCGCTGCACCAGGTGACTTTCCGCTTCCGCCTCGACACTTCGCAACTGCCGCGCCCGTTCCAGATCGGCGTGGTCGGGCAGGCTGACTGGAATATTGCCGCCGAGCGCACAGCGCGGCTGGCGGTGGAGAAGCAGAAGTGA
PROTEIN sequence
Length: 198
VLLWAWVVWMAWLPVPAAAQGRPGASISQMRLEQADDGVYLSASVQFELPSLVEEVLDKGIAIYFVAEAELFQERWYWTDRKVAQVQRHMRLAYQPLTRRWRLNVSPVPITGAAGLGISLNQNFDTLSDALDAIKRVGRMRLGDVAEIGDDPLHQVTFRFRLDTSQLPRPFQIGVVGQADWNIAAERTARLAVEKQK*