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SCNpilot_cont_300_bf_scaffold_214_curated_56

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(91719..93206)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 444.0
  • Bit_score: 834
  • Evalue 6.10e-239
sun protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] similarity KEGG
DB: KEGG
  • Identity: 90.2
  • Coverage: 457.0
  • Bit_score: 829
  • Evalue 4.40e-238
Ribosomal RNA small subunit methyltransferase RsmB n=1 Tax=Variovorax sp. CF313 RepID=J2KAL9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 444.0
  • Bit_score: 834
  • Evalue 4.30e-239

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1488
ATGGGCCGTGCGTCTGCGTCCGGCCGCGCCGCTGCTCTGACGCGGTCATTTTTTCTTTCCATTGCACGGCGTCCGGCCTTTCGCCCGCCCGTTACCATCGCCCCCAACTTGGCCGAACTACCTTCCGATCTCCCCAGCAACGGCGCCCCGCAGCCGCTGCAACCGCCGCTCTGGCGCCAACTGCAATTGACCGCGGTGGCGCTGGCGTCGATTCGCGCCGGCACCTCGGGCTCCGTCGCCTTCGAAGCCGTCGAACCCGCGCTGCGGCCCGGCGTGCAGGCGCTCGGCTTCCAGGTGCTGCGCTGGCTCGGCCGCGCCGAGGCGCTGCGCCGCCATCTGGCCAAGCGCACGCCGCCGCCATTGCCCGACGCCTTGCTGTGCACCGCGCTGGCGCTTGCGTGGGACGGCACGCGCGCACCCTACGAACCGTTCACGCTGGTCGACCAGGCCGTCGAGGCCGCCAAGCGCAACCCGGCCACGCGGGCGCAGGCCAGCTTCATCAACGCCTGTCTTCGGCGCTTCCTGCGCGAGCGCGACGAACTTGTGGCCGTGACCGATTCCGAGCCGGTCGCGCAATGGAACCATCCGCGCTGGTGGATCGAACGCCTCAAGCGCGACCATCCCCGCGACTGGCAGCGCGTGCTCGCCGCCGACAACGCACAGGCGCCGATGACGCTGCGCGTCAATGCACGCAAGTCGACCGCCGCTTCCTATCTGGTGGAGCTTGAGGCCGCCGGCCTCTCGGCTACGCGCGTGGGCCCCAGCGGTCTTCAACTGGCCCGTGCCCGGCCCGTGCAGCAACTGCCCGGTTTTGCCGAAGGCGCCAGTTCGGTGCAGGACGCCGCCGCGCAAATGGCCGCGCCCCTGTTGCTCGAAGGCCTGTTGCCGGCCGCTCCCGGCGGCGTGCCGCTGCGGGTGCTCGATGCCTGCGCCGCCCCCGGCGGCAAGACCGCGCATCTGCTCGAGCTGGCCGGCCCCGACGCCATCGACGTCACAGCGCTCGAAGTCGACGCGGTGCGCAGCCGGCGCATCGACGAGACCCTGGCGCGCATCGGCCTGAAGGCCCGTGTGCTGGTGGCCGATGCCGCGCGCCCCGCCGACTGGTGGGACCGCACGCCGTTCGACGCGATCCTGCTCGACGCGCCATGCACCGCATCGGGCATCGTGCGCCGCCATCCCGATGTCCGCTGGCTGCGCCGCGAGAGCGACACCGCCCAGCTCTCTGCCCAGCAGGCCGCGTTGCTGGCCGCGCTCTGGCCGCTCGTGCGGACCGGCGGGCGGCTTCTTTACTGCACCTGTTCCGTCTTCCGGGAAGAGGGTTCGCAACAAATTGATGCGTTTCTTGTACACAACACCGACGCACGATTGCTGCCATCGCCCGGCCATTTGCTGCCCCAAAGCGGGTCGAATGCCCGTGGCGTCCCGGACAATCCCTCTGGTGATCACGACGGCTTCTTCTACGCCCTGCTTGAAAAGCGCCCGCACTGA
PROTEIN sequence
Length: 496
MGRASASGRAAALTRSFFLSIARRPAFRPPVTIAPNLAELPSDLPSNGAPQPLQPPLWRQLQLTAVALASIRAGTSGSVAFEAVEPALRPGVQALGFQVLRWLGRAEALRRHLAKRTPPPLPDALLCTALALAWDGTRAPYEPFTLVDQAVEAAKRNPATRAQASFINACLRRFLRERDELVAVTDSEPVAQWNHPRWWIERLKRDHPRDWQRVLAADNAQAPMTLRVNARKSTAASYLVELEAAGLSATRVGPSGLQLARARPVQQLPGFAEGASSVQDAAAQMAAPLLLEGLLPAAPGGVPLRVLDACAAPGGKTAHLLELAGPDAIDVTALEVDAVRSRRIDETLARIGLKARVLVADAARPADWWDRTPFDAILLDAPCTASGIVRRHPDVRWLRRESDTAQLSAQQAALLAALWPLVRTGGRLLYCTCSVFREEGSQQIDAFLVHNTDARLLPSPGHLLPQSGSNARGVPDNPSGDHDGFFYALLEKRPH*