ggKbase home page

SCNpilot_cont_300_bf_scaffold_190_curated_16

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 16917..17366

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000377EE86 similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 148.0
  • Bit_score: 266
  • Evalue 1.90e-68
Uncharacterized protein {ECO:0000313|EMBL:EMG55224.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 141.0
  • Bit_score: 152
  • Evalue 5.50e-34
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 126.0
  • Bit_score: 97
  • Evalue 4.70e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ochrobactrum sp. CDB2 → Ochrobactrum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGATTCGTCACGAACTCAGTCAATGGCCCCTCGTCATCAGCGTCTCCTCGGGGCTGCAGACGCTCGAGAGCATGCAGGCCTTCACGCAAGACTGGAACGGCTGGCTCGACCGCGGCCAGCCCTTCGCGTCGCTGCGCGTGTTCGCCGATGCCGATGCGCTGGTGCATCCGGAGGGCAGCGCACAGAGCGCCAAGCAATGGCTGCAGGAGCGCGGCGGCGACATCCGCCGCCATATGATGGGCATGGCGAGCGTGGTGCCCGCCGACCAGTACGAGAAAATCCGCAAGATGAATGTAGAGAAACTCTTCGGCGTGCCCGCCAGCACCTTTGCGGATACCGACGATGCGCTGGCGTGGCTGTCGGAACGCGTGATGGCGCCGCGCGGCCTGCCGTTCGACCTGGCGGCTGTGCGCGCGGCCATCCGCTCGGCGGCGGCCGTGGTTCCCTGA
PROTEIN sequence
Length: 150
MIRHELSQWPLVISVSSGLQTLESMQAFTQDWNGWLDRGQPFASLRVFADADALVHPEGSAQSAKQWLQERGGDIRRHMMGMASVVPADQYEKIRKMNVEKLFGVPASTFADTDDALAWLSERVMAPRGLPFDLAAVRAAIRSAAAVVP*