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SCNpilot_cont_300_bf_scaffold_190_curated_51

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(47961..48605)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI00037053A0 similarity UNIREF
DB: UNIREF100
  • Identity: 91.6
  • Coverage: 215.0
  • Bit_score: 415
  • Evalue 3.60e-113
Variovorax paradoxus strain MEDvA23 contig_20, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33578.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 214.0
  • Bit_score: 415
  • Evalue 6.50e-113
pepsy-associated tm helix domain-containing protein; K09939 hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 215.0
  • Bit_score: 411
  • Evalue 2.10e-112

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGACTGCCGCCCACGCTGACAACCGACGCCGCGCCTATTGGCTCAAGACCCTGCATGAATGGCACTGGGTCAGCTCGGCGATCTGCCTGATCGGCATGATCCTTTTCAGCATCACAGGCTTCACGCTGAACCATGCCGGCCAGATCGAGGCCAAGCCGGCCGTCACCAAGCGCAGCGGCACAGTTGACGAAGCCTTGCGCGCGCAGCTCGAAAAGCAACTGCCCGCCGCCAAGGCCGAGAAGGGCAAGGCCCCCCTGCCCGCCGAACTGCAAGCCTGGGTCCAGCAGCACTGGGACATCGCCACAGCCGGCCGCGACGCCGAGTGGTCGGACGACGAAATCTATCTTTCGCTCCCCCGCCCTGGCGGCGACGCCTGGCTGCGCCTGAGCCTGACCGACGGCGAGATCGAATACGAGCGCACCGACCGCGGCTGGCTCTCCTACTTCAACGACCTCCACAAGGGCCGCAACACCGGCGCTGCGTGGAGCTGGTTCATCGACATCTTCGCGGGCGCCGCGCTGGTCTTCTCGATCACCGGCCTGTTCATTCTCAAGATGCACGCCGGCAACCGCCCGTTCACCTGGCCCATGGTCGGCATGGGGCTGGTGGTGCCGGTGCTGCTCGCGCTGCTGTTCATTCACTGA
PROTEIN sequence
Length: 215
MTAAHADNRRRAYWLKTLHEWHWVSSAICLIGMILFSITGFTLNHAGQIEAKPAVTKRSGTVDEALRAQLEKQLPAAKAEKGKAPLPAELQAWVQQHWDIATAGRDAEWSDDEIYLSLPRPGGDAWLRLSLTDGEIEYERTDRGWLSYFNDLHKGRNTGAAWSWFIDIFAGAALVFSITGLFILKMHAGNRPFTWPMVGMGLVVPVLLALLFIH*