ggKbase home page

SCNpilot_cont_300_bf_scaffold_190_curated_181

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 177589..178503

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XES5_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 304.0
  • Bit_score: 585
  • Evalue 3.70e-164
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 97.4
  • Coverage: 304.0
  • Bit_score: 585
  • Evalue 1.20e-164
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGU50595.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 304.0
  • Bit_score: 585
  • Evalue 5.20e-164

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGCACGCCAGCATTCTCAAATACTTCATCGAGGTGGCGAGCTGCGGCTCGGTGCGCAAGGCCTCGGAGCGGCTCTTCGTTGCGGCGAGCGCGGTCAACCGGCAGATCCACAAGCTGGAGGACGAACTGGGCGTGGAGCTGTTCGACCGCATGCCCAACGGCCTGCGCCTGAACGCGGCCGGCGAGCGCCTGCTCAAGCATGCGCAGGAGACGCTGCACCAGTACCAGGTGATGCGCACCGAGCTCGACGCGCTCAAGGGCGAGCGCACTGGCCACGTGAAGGTGGCCGCCATGGACTCGTTCTTCGAAGACCTGCTGCCCTCGGCGGTGGAAGATTTCCTGCAGGTGTTCCCGGCGGTCACGTACACCATCACCGCGGTACAGCCCATGGACGTGGCGCAGATGGTGATGTCGGGCCAGGTCGACGTGGGCATGACCTTCGTGAGCCGGCTGCCCGGCGGCGTGGCGGCGGTGGCGCTGGCCAACCTGCCGATCGGCGTGGTGATGCCGCCCGGCCATCCGCTGGCCAACCATGCGCGCGTGTCGCTGAAGGAATGCGCGCGCTATCCGTTCCTGCGCTCCAGCTCGCACCCGGTCATCAGCGCCGCGCTGTCGCCCGAGTTCGCCGCGTTCTGGGACGACATGGAGCCGGCCGCCACCTGCAATTCGACGCCCATGCTCAAGCGGCTGATCATGGCCGGCAAGGGCATCTCGTGCTTCTCGAAGATCGCCTTCATCGAAGACCTGAAGCGCGGCGACCTGATCTGGCGGCCCTTCGAGCTGCCGGCGCTCGACCAACTGCAGGTCGGCATCGTGGTGCCGTCGCAGCGGGTGCTGCCGCACGTCACGCAGAACTTCGTCGGCCGCATGGCGCGCCGGCTGACCCAACTCGAGATCGCAGCCGCCGCCGTGTGA
PROTEIN sequence
Length: 305
MHASILKYFIEVASCGSVRKASERLFVAASAVNRQIHKLEDELGVELFDRMPNGLRLNAAGERLLKHAQETLHQYQVMRTELDALKGERTGHVKVAAMDSFFEDLLPSAVEDFLQVFPAVTYTITAVQPMDVAQMVMSGQVDVGMTFVSRLPGGVAAVALANLPIGVVMPPGHPLANHARVSLKECARYPFLRSSSHPVISAALSPEFAAFWDDMEPAATCNSTPMLKRLIMAGKGISCFSKIAFIEDLKRGDLIWRPFELPALDQLQVGIVVPSQRVLPHVTQNFVGRMARRLTQLEIAAAAV*