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SCNpilot_cont_300_bf_scaffold_190_curated

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Displaying items 181-210 of 278 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_190_curated_181
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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177589..178503
DNA (915bp) protein (305aa)
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XES5_VARPD
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGU50595.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_190_curated_182
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

178553..179314
DNA (762bp) protein (254aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EUC11900.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EUC11900.1};; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. BT03.;"
Uncharacterized protein n=1 Tax=Burkholderia sp. BT03 RepID=J2RS33_9BURK
putative oxidoreductase, SDR family
SCNpilot_cont_300_bf_scaffold_190_curated_183
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

179314..180252
DNA (939bp) protein (313aa)
dihydrodipicolinate synthetase; K13876 2-keto-3-deoxy-L-arabinonate dehydratase [EC:4.2.1.43]
Dihydrodipicolinate synthetase n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BDT2_RALP1
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:ACS63867.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
SCNpilot_cont_300_bf_scaffold_190_curated_184
Burkholderia lata, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180272..181282)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036D36F9
hypothetical protein; K09925 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB05681.1}; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194; / 383).;"
SCNpilot_cont_300_bf_scaffold_190_curated_185
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

181425..182333
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XE66_VARPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU50594.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_190_curated_186
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

182330..183337
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XCG1_VARPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU50592.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_190_curated_187
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(183309..183884)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI000381BD1E
hypothetical protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
SCNpilot_cont_300_bf_scaffold_190_curated_188
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(183881..184555)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000365C623
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS63946.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
SCNpilot_cont_300_bf_scaffold_190_curated_189
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(184645..185103)
DNA (459bp) protein (153aa)
Endoribonuclease L-PSP n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CSR8_VARPS
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ACS20025.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_300_bf_scaffold_190_curated_190
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(185100..186056)
DNA (957bp) protein (319aa)
Transglutaminase-like enzyme, predicted cysteine protease n=1 Tax=Variovorax sp. CF313 RepID=J3CCG1_9BURK
Transglutaminase-like enzyme, predicted cysteine protease {ECO:0000313|EMBL:EJL68661.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
transglutaminase
SCNpilot_cont_300_bf_scaffold_190_curated_191
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(186092..186916)
DNA (825bp) protein (275aa)
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Variovorax sp. CF313 RepID=J2JLA4_9BURK
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:EJL68660.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
family 3 extracellular solute-binding protein; K02030 polar amino acid transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_190_curated_192
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(187039..189774)
DNA (2736bp) protein (912aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CR59_9BURK
Variovorax paradoxus strain MEDvA23 contig_46, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29007.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_190_curated_193
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(189839..193366)
DNA (3528bp) protein (1176aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2K9D5_9BURK
Variovorax paradoxus strain MEDvA23 contig_46, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29008.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_190_curated_194
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

193507..195975
DNA (2469bp) protein (823aa)
DNA internalization-related competence protein ComEC/Rec2 n=1 Tax=Variovorax sp. CF313 RepID=J3CRP0_9BURK
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:EJL76866.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative DNA internalization-like competence protein ComEC/Rec2
SCNpilot_cont_300_bf_scaffold_190_curated_195
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

196119..196967
DNA (849bp) protein (283aa)
enoyl-CoA hydratase n=1 Tax=Variovorax paradoxus RepID=UPI0003618A74
enoyL-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ADU36420.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_cont_300_bf_scaffold_190_curated_196
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

197067..198566
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2TEU0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL76867.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_190_curated_197
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

198580..199536
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035F50B0
Uncharacterized protein {ECO:0000313|EMBL:EJL76868.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_190_curated_198
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(199574..201148)
DNA (1575bp) protein (525aa)
sulfatase n=1 Tax=Variovorax paradoxus RepID=UPI000368F010
Variovorax paradoxus strain MEDvA23 contig_46, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29012.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
sulfatase
SCNpilot_cont_300_bf_scaffold_190_curated_199
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

201427..201888
DNA (462bp) protein (154aa)
peptide-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000370635D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS20017.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_300_bf_scaffold_190_curated_200
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(201919..203415)
DNA (1497bp) protein (499aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
glycerol kinase; K00864 glycerol kinase [EC:2.7.1.30]
glycerol kinase n=1 Tax=Variovorax paradoxus RepID=UPI000372FFC2
SCNpilot_cont_300_bf_scaffold_190_curated_201
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(203440..204210)
DNA (771bp) protein (257aa)
Transcriptional regulator of sugar metabolism n=1 Tax=Variovorax sp. CF313 RepID=J2TEU2_9BURK
Transcriptional regulator of sugar metabolism {ECO:0000313|EMBL:EJL76872.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
DeoR family transcriptional regulator; K02444 DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
SCNpilot_cont_300_bf_scaffold_190_curated_202
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

204400..205983
DNA (1584bp) protein (528aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
glyceroL-3-phosphate dehydrogenase (EC:1.1.5.3); K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
Glycerol-3-phosphate dehydrogenase n=1 Tax=Variovorax sp. CF313 RepID=J2KV28_9BURK
SCNpilot_cont_300_bf_scaffold_190_curated_203
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

206045..207103
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2K9E7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL76880.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_190_curated_204
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

207093..208229
DNA (1137bp) protein (379aa)
3-oxoacyl-(Acyl-carrier-protein) synthase III n=1 Tax=Variovorax sp. CF313 RepID=J3CRQ1_9BURK
3-oxoacyl-(Acyl-carrier-protein) synthase III {ECO:0000313|EMBL:EJL76881.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
3-oxoacyl-[acyl-carrier-protein (ACP)] synthase 3 domain-containing protein
SCNpilot_cont_300_bf_scaffold_190_curated_205
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

208232..208627
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2TEU8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL76882.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_190_curated_206
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

208624..209604
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2KV37_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL76883.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_190_curated_207
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

209604..210512
DNA (909bp) protein (303aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Variovorax sp. CF313 RepID=J3CR74_9BURK
ABC transporter, ATP-binding protein
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:EJL76884.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
SCNpilot_cont_300_bf_scaffold_190_curated_208
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

210524..211681
DNA (1158bp) protein (386aa)
ABC-type multidrug transport system, permease component n=1 Tax=Variovorax sp. CF313 RepID=J2K9F3_9BURK
ABC-type multidrug transport system, permease component {ECO:0000313|EMBL:EJL76885.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
ABC transporter; K09686 antibiotic transport system permease protein
SCNpilot_cont_300_bf_scaffold_190_curated_209
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

211678..211959
DNA (282bp) protein (94aa)
Acyl carrier protein n=1 Tax=Variovorax sp. CF313 RepID=J3CRQ4_9BURK
Variovorax paradoxus strain MEDvA23 contig_132, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16757.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
phosphopantetheine-binding protein; K02078 acyl carrier protein
SCNpilot_cont_300_bf_scaffold_190_curated_210
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

211956..213026
DNA (1071bp) protein (357aa)
beta-ketoacyl synthase; K00647 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
3-oxoacyl-(Acyl-carrier-protein) synthase n=1 Tax=Variovorax sp. CF313 RepID=J2TEV2_9BURK
3-oxoacyl-(Acyl-carrier-protein) synthase {ECO:0000313|EMBL:EJL76887.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
Displaying items 181-210 of 278 in total

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