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SCNpilot_cont_300_bf_scaffold_190_curated

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Displaying items 271-278 of 278 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_190_curated_271
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(297235..298020)
DNA (786bp) protein (262aa)
Transcriptional regulator, IclR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UWV2_VARPE
IclR family transcriptional regulator; K02624 IclR family transcriptional regulator, pca regulon regulatory protein
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ADU36497.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_cont_300_bf_scaffold_190_curated_272
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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298220..299143
DNA (924bp) protein (308aa)
shikimate dehydrogenase substrate binding domain-containing protein; K00014 shikimate dehydrogenase [EC:1.1.1.25]
Shikimate dehydrogenase substrate binding domain protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UWV3_VARPE
Variovorax paradoxus strain MEDvA23 contig_132, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16710.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
SCNpilot_cont_300_bf_scaffold_190_curated_273
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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299172..300005
DNA (834bp) protein (278aa)
shikimate dehydrogenase substrate binding domain-containing protein; K00014 shikimate dehydrogenase [EC:1.1.1.25]
Shikimate 5-dehydrogenase n=1 Tax=Variovorax sp. CF313 RepID=J3CX84_9BURK
Shikimate 5-dehydrogenase {ECO:0000313|EMBL:EJL80111.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
SCNpilot_cont_300_bf_scaffold_190_curated_274
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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300022..301236
DNA (1215bp) protein (405aa)
3-carboxy-cis,cis-muconate cycloisomerase; K01857 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
3-carboxy-cis,cis-muconate cycloisomerase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UWV5_VARPE
3-carboxy-cis,cis-muconate cycloisomerase {ECO:0000313|EMBL:ADU36500.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_cont_300_bf_scaffold_190_curated_275
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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301233..301667
DNA (435bp) protein (145aa)
carboxymuconolactone decarboxylase; K01607 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2L4H3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL80113.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
SCNpilot_cont_300_bf_scaffold_190_curated_276
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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301664..302884
DNA (1221bp) protein (407aa)
MFS transporter n=1 Tax=Variovorax paradoxus RepID=UPI00037CC0D1
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJL80114.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
Bcr/CflA subfamily drug resistance transporter; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein
SCNpilot_cont_300_bf_scaffold_190_curated_277
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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302881..303645
DNA (765bp) protein (255aa)
alpha/beta hydrolase fold protein; K01055 3-oxoadipate enol-lactonase [EC:3.1.1.24]
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Variovorax sp. CF313 RepID=J2KIW6_9BURK
Variovorax paradoxus strain MEDvA23 contig_132, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16706.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
SCNpilot_cont_300_bf_scaffold_190_curated_278
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

303779..304807
DNA (1029bp) protein (343aa)
4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27); K00457 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
4-hydroxyphenylpyruvate dioxygenase/hemolysin-like protein n=1 Tax=Variovorax sp. CF313 RepID=J3CX86_9BURK
4-hydroxyphenylpyruvate dioxygenase/hemolysin-like protein {ECO:0000313|EMBL:EJL80116.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
Displaying items 271-278 of 278 in total

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