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SCNpilot_cont_300_bf_scaffold_190_curated_273

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 299172..300005

Top 3 Functional Annotations

Value Algorithm Source
shikimate dehydrogenase substrate binding domain-containing protein; K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 277.0
  • Bit_score: 529
  • Evalue 6.90e-148
Shikimate 5-dehydrogenase n=1 Tax=Variovorax sp. CF313 RepID=J3CX84_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 97.1
  • Coverage: 277.0
  • Bit_score: 540
  • Evalue 9.50e-151
Shikimate 5-dehydrogenase {ECO:0000313|EMBL:EJL80111.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 277.0
  • Bit_score: 540
  • Evalue 1.30e-150

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
ATGATTTCCGGCAAGACAACGCTCATCGCCCACCTGGGTTTTCCGACCGAGGCCTTCAAGGCGCCGATGATCTACAACCCCTGGTTCGACAAGCAGGGCATCGACGCGGTGGTGGTGCCGATGGGCGTGAAGCCCGAGGACTACGCGGCCTCGCTGCCGCAGATCTTCAAGTTCAGCAACCTGCGCGGCGCGCTGGTGACGATGCCGCACAAGGTGACGACGATGTCGCTGGTGGACGAGGTGACGCCCACCGCCCGCGTGGCCGGCGCCTGCAACGCCATTCTCAAGCGGCCCGACGGCACGCTGCTGGGCGACCAGTTCGACGGCGCCGGCTTCGTGCGCGGCGTGGAGCGCAAGGGGCGGCTCTTCAAGGGCACGCGGGTGCTGGTGTCCGGCACGGGCGGTGTCGGCTCCGCCATCGCGGCATCGATTGCCGCCGCAGGCGCCGCGGAGCTGATGTTGTTCGACATGAGCGAGGCTTCGGCCGGCGCGCTGGCCGCGCGTCTGCGCGAGCACTATCCGCAAATGAAGGTGGCGACGGGCTCGAAGGACCCGGCCGGCTACGACGTGGTCGTCAACGCCACGCCGCTCGGCATGAAGGAGGGCGACCCGCTGCCGTTCGACGTGGACCGCATCGACCCCGGCACCTTCGTGGGCGAAGTCGTGATGAAGACCGAGTACACGCCGCTGCTCGAGGCCGCCAAGGCCAAGGGCTGCCAGGTGCAGGTCGGCACCGACATGCTGTTCGAGATGATTCCTGCCTACCTCGAGTTCTTCGGTTTTGGCACAGCGTCCCCAGAGGAATTACGTGCCGTGGCCCAATTGAAATATTGA
PROTEIN sequence
Length: 278
MISGKTTLIAHLGFPTEAFKAPMIYNPWFDKQGIDAVVVPMGVKPEDYAASLPQIFKFSNLRGALVTMPHKVTTMSLVDEVTPTARVAGACNAILKRPDGTLLGDQFDGAGFVRGVERKGRLFKGTRVLVSGTGGVGSAIAASIAAAGAAELMLFDMSEASAGALAARLREHYPQMKVATGSKDPAGYDVVVNATPLGMKEGDPLPFDVDRIDPGTFVGEVVMKTEYTPLLEAAKAKGCQVQVGTDMLFEMIPAYLEFFGFGTASPEELRAVAQLKY*