ggKbase home page

SCNpilot_cont_300_bf_scaffold_190_curated_276

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 301664..302884

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter n=1 Tax=Variovorax paradoxus RepID=UPI00037CC0D1 similarity UNIREF
DB: UNIREF100
  • Identity: 90.2
  • Coverage: 410.0
  • Bit_score: 763
  • Evalue 1.00e-217
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJL80114.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 407.0
  • Bit_score: 755
  • Evalue 3.80e-215
Bcr/CflA subfamily drug resistance transporter; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 401.0
  • Bit_score: 741
  • Evalue 1.30e-211

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1221
GTGAGCGCGCCGGGCGCCCGCAAGGGCCGGTTCGACATCAGTTTCGCGCTGCTGCTGCCGCTGCTGCTGGCGGCGCAGCCCGTGGCCACCGACAGCTACCTGCCGGCGCTGCCCGCCATCGCCAAGGAGCTCGGCTCCGCCAGCACCAGCCTCACGCTGTTCGTGCTGGCTTTCGGCTTCGCGCAACTGCTGTGCGGCCCGCTGGCCGACCGCTTCGGCCGGCGGCCGGTGCTGCTGGCGGGGCTGGGCTGCTACGTGCTCGCGGCGCTGGGCGGCGCGTTCGCGGACAGCGTGGCGCTGCTCGCGGGCTGGCGCGCGCTGCAGGGCTTTTCGATGGCCGCCATCCTCGTGTGCTCGCGCGCCGCGGTGCGCGACCTGTACCCGGCGCACGAAGGGCCGCACGTCATGGCGCGCGGCCTCACCGGGCTGGGCGTGGTGGGGCTGCTGGCGCCGCTGCTGGGCGCATGGCTGGTGCAGGGCGCGGGCTGGCGCTGGGTGATGGTGGCGATGGCGGTCTACGCCTCGGTGCTGTTCGCGATGTGCTGGTACTCGTTCGCGGAAACGCGCAAGCCGATGGGCGAAGACGGCCTCTCCGCCCCGCGCGGCAGCACCCGCACCGTGTTCGCGAGCCGCTCGTTCCGTGCCTGGGCTTCGGTGGCCGCGTCGACCTACGGCGGGCTCTTCTGCTTCCTGCTGCTGTCGCCGATGGTCTACATCGGCTATCTCGGCTGGTCGCCCGCCTGGTACGGCTGGATCCCGGCCGGCGGCTCGCTGGTCTACATCTTCAGCACCACCATGTGCCGCACGCTGCTGCGGCGCTATGGGCCGGTGCGCACCGTGCGGCTCGGCGCCTCGCTCAGCATCACCGGCGCCGTGATCCAGGCCCTCGGCTGCTGGTTGATGCCGCTCAGCGCGGTGCCGCTGCTCTTCGGGCATGCGGTGTACTGCCTCGGCCACGGCATCCACCAGCCCTGCGGCCAGGCCGGCGCGGTGGGCGATTTGCCGCATCTCGCGGGCCGGGCCGTGTCGTGGTCGGGCTTCGGCATGATGATGGTCGCGTTCTGCGTGGGGCAGTTGGCCGCGCGCTTCGTCGACGCCGACTACAGCTACGGCGCCTGGCCGATGGTCGTGCCGATGCTGCTGGCCGGCATCTCGCTGATGGCCATCGCGTTTTTCTGGCTGCCACGTCTTCAACATCCGACAAAGGAAACCACACCATGA
PROTEIN sequence
Length: 407
VSAPGARKGRFDISFALLLPLLLAAQPVATDSYLPALPAIAKELGSASTSLTLFVLAFGFAQLLCGPLADRFGRRPVLLAGLGCYVLAALGGAFADSVALLAGWRALQGFSMAAILVCSRAAVRDLYPAHEGPHVMARGLTGLGVVGLLAPLLGAWLVQGAGWRWVMVAMAVYASVLFAMCWYSFAETRKPMGEDGLSAPRGSTRTVFASRSFRAWASVAASTYGGLFCFLLLSPMVYIGYLGWSPAWYGWIPAGGSLVYIFSTTMCRTLLRRYGPVRTVRLGASLSITGAVIQALGCWLMPLSAVPLLFGHAVYCLGHGIHQPCGQAGAVGDLPHLAGRAVSWSGFGMMMVAFCVGQLAARFVDADYSYGAWPMVVPMLLAGISLMAIAFFWLPRLQHPTKETTP*