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SCNpilot_cont_300_bf_scaffold_190_curated_191

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(186092..186916)

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Variovorax sp. CF313 RepID=J2JLA4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 269.0
  • Bit_score: 474
  • Evalue 8.20e-131
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:EJL68660.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 269.0
  • Bit_score: 474
  • Evalue 1.20e-130
family 3 extracellular solute-binding protein; K02030 polar amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 270.0
  • Bit_score: 461
  • Evalue 2.30e-127

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGCTCAGCAACATCATCAACCGCCGCTTCGCACTCACTACCGCCGCGCTGCTCACGGCCCTGGCCATCGCCGGCTGCGGCAAGCAGGAAGCAGCCGCGCCCGCCGCCTCCGCCAGCGCACCGCCTCCGCCGGCCGCCGCGCGCGTGCTCGTGGTCGGCACCGACGCCGCCTACACACCCTTCGAATCGCAGAACGACAAGGGCGACGTGGTGGGCTTCGACATCGACGTGGTGAAGGCGGTCGCGCAGAAGGCCGGGCTCGAGGTCAAGTTCGTCAACACGCCGTGGGAAGGCATCTTCAATTCGCTCGACCAGGGCGACCGCGACCTGCTGGTGTCGGCCATCACCATCACCGACGAGCGCCGCCAAACCATGGACTTCTCGCAGCCGTACTTCGACGCCAAGCAACTGATCGCCGTCAAGAGCGATTCGCCGGTCGCCAAGTTCGAGGACATCAAGAACCTGAAGGTCGGCGTGCAGAACGGCACCACCGGCGACGAAGTCGTGGGCAAGCTGCTGGGCAAGTCGAGCACCGCCATCAAGCGCTTCGAGTCGACCCCGCTCGCACTCAAGGAGCTGGAAGCCGGCGGCGTGCAGGCCGTGGTGGCCGACAACGGCGTGATCGTGCACTACCTCGCGAACAACGCGGCAGGCGGCTTCAAGACGGTGAGCGACGCGAGCTTCCCGGTCGAGAAGTACGGCATTGCCGTGAAGAAGGGCAACGCCGAATTGCTCGCCAAGATCAACCAGGGCCTCGAAGCGATTCGCACCGACGGCACCTACGCCAAGATCTACGCCTCGCACTTCGGCGCCGAGTCGAAGTAA
PROTEIN sequence
Length: 275
MLSNIINRRFALTTAALLTALAIAGCGKQEAAAPAASASAPPPPAAARVLVVGTDAAYTPFESQNDKGDVVGFDIDVVKAVAQKAGLEVKFVNTPWEGIFNSLDQGDRDLLVSAITITDERRQTMDFSQPYFDAKQLIAVKSDSPVAKFEDIKNLKVGVQNGTTGDEVVGKLLGKSSTAIKRFESTPLALKELEAGGVQAVVADNGVIVHYLANNAAGGFKTVSDASFPVEKYGIAVKKGNAELLAKINQGLEAIRTDGTYAKIYASHFGAESK*