ggKbase home page

SCNpilot_cont_300_bf_scaffold_53_curated_31

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 31240..31950

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component n=1 Tax=Variovorax sp. CF313 RepID=J2TMV0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 236.0
  • Bit_score: 428
  • Evalue 5.80e-117
Variovorax paradoxus strain MEDvA23 contig_52, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27872.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 234.0
  • Bit_score: 428
  • Evalue 4.80e-117
ABC transporter; K02003 putative ABC transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 95.3
  • Coverage: 234.0
  • Bit_score: 427
  • Evalue 3.10e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGTCCCAACCCCCGTCTGATGCCATTGTCGCCGTCGAGCATGTCTTCAAGTCCGTGACCGACTCGGCCGGCACGCTGGACATTCTGCAGGACATCCATTTCACCCTCGGCGCGCGGGAAACCGCCGCCATCGTCGGCGCCTCGGGTTCGGGCAAGAGCACCTTGCTTTCGATCATCGCGGGGCTGGACACGCCCACTCGCGGCACTGTCAGGCTAGCGGGCGACGACCTGTTCGCCATCGACGAGGACGAGCGCGCCGCCGTGCGCGCGCAGCGCGTGGGCTTCGTGTTCCAGAGCTTCCAGCTGCTGGGCAACCTCAGCGCGCTCGAGAACGTGATGCTCCCGCTGGAACTGGCCAACCGCAAGGATGCCCGCAAGGCCGCCACCGAGATGCTGGGCCGAGTCGGGCTGGGCCAGCGGCTGGGGCACTACCCGAAGGTGCTTTCGGGCGGCGAGCAGCAGCGTGTGGCGCTGGCACGGGCCTTCGTGGTGCAGCCGGCCCTGCTGCTGGCGGACGAGCCCACCGGCAGCCTCGACTTCGCGACCGGCGAGCAGGTCATGAAGCTGATGTTCGATCTGAACCGCGAACTGGGCACTACGCTCGTGCTCGTTACGCACGACCGCGGCATCGCCGACCGGTGCGAACGCCGCATCACCATCGAGGCCGGCCGCGTCGCAGGTAATGAAAAAGCTGCCGTAGCGCCCGGCTGA
PROTEIN sequence
Length: 237
MSQPPSDAIVAVEHVFKSVTDSAGTLDILQDIHFTLGARETAAIVGASGSGKSTLLSIIAGLDTPTRGTVRLAGDDLFAIDEDERAAVRAQRVGFVFQSFQLLGNLSALENVMLPLELANRKDARKAATEMLGRVGLGQRLGHYPKVLSGGEQQRVALARAFVVQPALLLADEPTGSLDFATGEQVMKLMFDLNRELGTTLVLVTHDRGIADRCERRITIEAGRVAGNEKAAVAPG*