name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_300_bf_scaffold_53_curated_31
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31240..31950
|
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component n=1 Tax=Variovorax sp. CF313 RepID=J2TMV0_9BURK
Variovorax paradoxus strain MEDvA23 contig_52, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27872.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
ABC transporter; K02003 putative ABC transport system ATP-binding protein
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_32
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32019..32498
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000367FA70
Ribosomal protein L7/L12 {ECO:0000313|EMBL:EJL79973.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_33
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32503..33483
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000375484F
Uncharacterized protein {ECO:0000313|EMBL:EJL79974.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_34
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33517..34263
|
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB {ECO:0000256|HAMAP-Rule:MF_01887}; EC=2.1.1.185 {ECO:0000256|HAMAP-Rule:MF_01887};; 23S rRNA (guanosine2251 2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; 23S rRNA Gm2251 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB (EC:2.1.1.-)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Variovorax sp. CF313 RepID=J2KIF1_9BURK
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_35
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34271..35296)
|
FAD dependent oxidoreductase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZQ5_VARPE
Variovorax paradoxus strain MEDvA23 contig_52, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27918.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
fad dependent oxidoreductase
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_36
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(35587..35757)
|
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003773B78
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU37862.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_37
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(35862..36467)
|
transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00036436EA
transcriptional regulator, XRE family
Variovorax paradoxus strain MEDvA23 contig_52, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27876.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_38
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
36511..37032
|
phosphinothricin acetyltransferase; K03823 phosphinothricin acetyltransferase [EC:2.3.1.183]
Phosphinothricin acetyltransferase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZQ2_VARPE
Phosphinothricin acetyltransferase {ECO:0000313|EMBL:ADU37860.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_39
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(37040..37522)
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2KIF6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL79980.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_40
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(37536..38504)
|
Aldo/keto reductase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZQ0_VARPE
Variovorax paradoxus strain MEDvA23 contig_52, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27879.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
aldo/keto reductase
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_41
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(38543..39142)
|
Chromate transporter n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZP9_VARPE
chromate transporter; K07240 chromate transporter
Chromate transporter {ECO:0000313|EMBL:ADU37857.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_42
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(39139..39705)
|
Chromate transport protein ChrA n=1 Tax=Variovorax sp. CF313 RepID=J2L416_9BURK
Chromate transport protein ChrA {ECO:0000313|EMBL:EJL79983.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
Chromate transporter; K07240 chromate transporter
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_43
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
39792..40715
|
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI00035F6F20
ribonuclease bn; K07058 membrane protein
Ribonuclease BN {ECO:0000313|EMBL:ADU37855.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_44
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(40731..41291)
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2KIG2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL79985.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_45
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
41409..41858
|
CHRD domain containing protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZP5_VARPE
chrd domain containing protein
CHRD domain containing protein {ECO:0000313|EMBL:ADU37853.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_46
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
42005..43135
|
Patatin n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZP4_VARPE
patatin; K07001 NTE family protein
Patatin {ECO:0000313|EMBL:ADU37852.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_47
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
43220..43969
|
Acetoacetate decarboxylase n=1 Tax=Variovorax sp. CF313 RepID=J2L421_9BURK
Acetoacetate decarboxylase {ECO:0000313|EMBL:EJL79988.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_48
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
44016..44798
|
3-hydroxybutyrate dehydrogenase; K00019 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
3-hydroxybutyrate dehydrogenase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZP2_VARPE
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:ADU37850.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_49
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(44931..45872)
|
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2KIG8_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJL79990.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
GCN5-like N-acetyltransferaser
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_50
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
46029..48410
|
UPF0313 protein PMI12_00348 n=1 Tax=Variovorax sp. CF313 RepID=J3CX18_9BURK
UPF0313 protein PMI12_00348 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
ygiQ; putative radical SAM protein YgiQ
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_51
Herbaspirillum seropedicae, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(48477..49484)
|
GGDEF domain protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8J1C9_HERSS
diguanylate cyclase
GGDEF domain protein {ECO:0000313|EMBL:ADJ64698.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;"
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_52
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(49578..51545)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037EA428
Diguanylate cyclaSe/phosphodiesterase with PAS/PAC and GAF sensor {ECO:0000313|EMBL:EHJ99461.1}; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;"
PAS/PAC and GAF sensor-containg diguanylate cyclase/phosphodiesterase
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_53
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
51951..52868
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037AAA2B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU37845.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_54
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
52906..53811
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2TMX2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL79992.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_55
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(53827..54708)
|
Putative acyl-CoA transferase/carnitine dehydratase n=1 Tax=Variovorax sp. CF313 RepID=J2L425_9BURK
Putative acyl-CoA transferase/carnitine dehydratase {ECO:0000313|EMBL:EJL79993.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
L-carnitine dehydratase/bile acid-inducible protein f
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_56
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
54879..55781
|
oxidoreductase n=1 Tax=Variovorax paradoxus RepID=UPI0003787EB6
Uncharacterized protein {ECO:0000313|EMBL:EJL79994.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative oxidoreductase, SDR family
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_57
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(55800..56258)
|
Transcriptional regulator, AsnC family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZN3_VARPE
AsnC family transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ADU37841.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_58
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
56382..56990
|
Glutathione S-transferase domain n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZN2_VARPE
glutathione s-transferase domain-containing protein
Glutathione S-transferase domain {ECO:0000313|EMBL:ADU37840.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_59
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(57004..57393)
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2KIH3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL79995.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_53_curated_60
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(57425..59302)
|
Tat pathway signal protein n=1 Tax=Variovorax paradoxus RepID=UPI00036A2252
Putative phosphatase {ECO:0000313|EMBL:EJL79996.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein; K07093
|