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SCNpilot_cont_300_bf_scaffold_53_curated_36

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(35587..35757)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003773B78 similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 56.0
  • Bit_score: 104
  • Evalue 3.60e-20
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 56.0
  • Bit_score: 104
  • Evalue 1.50e-20
Uncharacterized protein {ECO:0000313|EMBL:ADU37862.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 56.0
  • Bit_score: 104
  • Evalue 6.50e-20

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 171
ATGTCCTTTGCGCTCTACATGATCGGATTCCTTATCTTCCTTGGCGGCCTTGTCTGGGGCGCCACGGTGGTGGGCGTGCCCACGCTCTACATCGGCATCGGGGCGACGATCCTGCTCGGGATCGGCATCTTCAGCGCTGTCGGCCGCACGCGCGGCAAAGACCCGTCCTGA
PROTEIN sequence
Length: 57
MSFALYMIGFLIFLGGLVWGATVVGVPTLYIGIGATILLGIGIFSAVGRTRGKDPS*