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SCNpilot_cont_300_bf_scaffold_53_curated_41

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(38543..39142)

Top 3 Functional Annotations

Value Algorithm Source
Chromate transporter n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZP9_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 94.5
  • Coverage: 199.0
  • Bit_score: 396
  • Evalue 1.60e-107
chromate transporter; K07240 chromate transporter similarity KEGG
DB: KEGG
  • Identity: 94.5
  • Coverage: 199.0
  • Bit_score: 396
  • Evalue 5.00e-108
Chromate transporter {ECO:0000313|EMBL:ADU37857.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 199.0
  • Bit_score: 396
  • Evalue 2.20e-107

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGACCATCGCGATGCACTGGCACGACTGGCTCGCCCTCTTCGGGCAGTACATGCTGCTTTCGCTGCTGTCGATCAGCGGCGCCATCACCACGGTGCCCGACATGCACCGCTACCTGGTGGCCCAGCACGGCTGGCTCACCGACGCGCAGTTCAGTTCCTCCGTGGCCATCGCGCAGGCCGCGCCCGGGCCCAACGTGCTGTTCGTGGCGCTGATGGGCTGGAACGTCGGGCTCAACGCGGGCGGCGGTATCGGCGCCGGGCCGGGGGCGTGGGTGCTGGGCTTCTTCGGGCTGCTCGTCACCATGGTCGGCATCATGCTGCCGAGCACCACCCTCACCTACTTCGCCACGCGCTGGGGCCACCGCAACCGCACCCGCCGCGAGGTGCGCGCCTTCAAGCAGGGCATGGCCCCCGTGGTGGTGGGCCTGCTGATCGCCACCGGCTGGGTGCTGGCGGCAGGAAACCATGCCGGCAATGCGCCCGCCTGGCACCTGTGGCTGCTTACAGGCACGGCTGCGCTTATCGTCTGGCGCACGCGCATCCACCTGCTCTGGCTGCTCGGCGCAGGCGCCGTGCTGGGCGCCATAGGCTTCGTCTGA
PROTEIN sequence
Length: 200
MTIAMHWHDWLALFGQYMLLSLLSISGAITTVPDMHRYLVAQHGWLTDAQFSSSVAIAQAAPGPNVLFVALMGWNVGLNAGGGIGAGPGAWVLGFFGLLVTMVGIMLPSTTLTYFATRWGHRNRTRREVRAFKQGMAPVVVGLLIATGWVLAAGNHAGNAPAWHLWLLTGTAALIVWRTRIHLLWLLGAGAVLGAIGFV*