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SCNpilot_cont_300_bf_scaffold_53_curated_57

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(55800..56258)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AsnC family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZN3_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 152.0
  • Bit_score: 275
  • Evalue 2.40e-71
AsnC family transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 152.0
  • Bit_score: 275
  • Evalue 7.50e-72
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ADU37841.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 152.0
  • Bit_score: 275
  • Evalue 3.40e-71

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGAACATCGACAGGAAAGACCGGCAGATCCTCGAGGCGCTGCAGGCCGACGCGCGGCAGAGCCTGGCCGCGCTGGGCAAGCGCATCGGCCTGTCGCAGCCGGCCATGAGCGAGCGGGTGCGCAAGCTCGAAGAGGCGGGCGTGATCGAAGGCTACGGCGCCCGCGTCAACCTGCGCGCGCTGGGCGTGGGCCTGCAGGCCATCATCCGCATCGAGACCACGCATGCGGGCATCGCCAGCTACCTGAAGCTGTTCGAGGCCATGCCCGAAGTGCTGAGCGCCGACCGCGTGACCGGCGAAGACTGCTTCATCGTGCGCTGCGCGATCGCCGAGCCGGCGGACCTGGAGCGCGTGGTCGACGCGCTGGCGGTCGATGGCGCGGTGACCACGTCGCTGGTGCTGTCGAGCCCGGTCAACAAGCACGTCACCGTGCATGCGGCCAGGCCACCGAAGAAATAG
PROTEIN sequence
Length: 153
MNIDRKDRQILEALQADARQSLAALGKRIGLSQPAMSERVRKLEEAGVIEGYGARVNLRALGVGLQAIIRIETTHAGIASYLKLFEAMPEVLSADRVTGEDCFIVRCAIAEPADLERVVDALAVDGAVTTSLVLSSPVNKHVTVHAARPPKK*