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SCNpilot_cont_300_bf_scaffold_53_curated_34

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 33517..34263

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB {ECO:0000256|HAMAP-Rule:MF_01887}; EC=2.1.1.185 {ECO:0000256|HAMAP-Rule:MF_01887};; 23S rRNA (guanosine2251 2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; 23S rRNA Gm2251 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 248.0
  • Bit_score: 478
  • Evalue 5.60e-132
rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 96.8
  • Coverage: 248.0
  • Bit_score: 472
  • Evalue 8.90e-131
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Variovorax sp. CF313 RepID=J2KIF1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 248.0
  • Bit_score: 478
  • Evalue 4.00e-132

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGTCTTCCCCTAAAGTGATCTTCGGCTTCCATGCCGTGGGCGTGCGCATCAAGACCGCGCCTAAATCGGTGCTCGAAGTGATGTTCGACGCCAGCCGGCGCGATGCGCGCATGAAACAGTTCATTGCGCGAGCGCAAGAAGCCGGTGTCCGGCTGGTCGAGGCCGACGGCCTGCGGCTGTCCAAGCTCAGCGGCAGCCACGGTCACCAGGGCGTGGTGGCGCGGGTCGAACCTGCCGCGCAAATCCATTCGCTCGACGAATTGCTCGAAGGCCTCGAAGAGGCCGGCACCGTGCCGCTGCTGCTGGTGCTCGACGGCGTGACCGACCCGCACAACCTCGGCGCCTGCCTGCGCGTGGCCGACGGTGCCGGCGCGCATGCGGTCATCGCGCCCAAGGACCATGCGGCGGGCATCAACGCCACCGTGGCCAAGGTGGCGAGCGGCGCTGCCGAGACGGTGCCGTACTTCATGGTGACCAACCTCGCGCGCACGCTCAACGAACTCAAGGAGCGCAGCATCTGGTGCGTGGGCACCAGCGACGATGCGCCGGGCACTATCTACCAGAGCGACTTCAAGCGCCCGCTGGCGCTGGTGCTGGGCGCCGAGGGCGAGGGCATGCGCCAGCTCACGCGCAAGACCTGCGACGAGCTCGTGAGCATCCCGATGGCCGGTGCCGTCGAGAGCCTGAACGTCTCGGTGGCCAGCGGCGTGTGCCTTTACGAGGCGATGCGCCAGCGCGGCGCCTGA
PROTEIN sequence
Length: 249
MSSPKVIFGFHAVGVRIKTAPKSVLEVMFDASRRDARMKQFIARAQEAGVRLVEADGLRLSKLSGSHGHQGVVARVEPAAQIHSLDELLEGLEEAGTVPLLLVLDGVTDPHNLGACLRVADGAGAHAVIAPKDHAAGINATVAKVASGAAETVPYFMVTNLARTLNELKERSIWCVGTSDDAPGTIYQSDFKRPLALVLGAEGEGMRQLTRKTCDELVSIPMAGAVESLNVSVASGVCLYEAMRQRGA*