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SCNpilot_cont_300_bf_scaffold_53_curated

Search features with annotation key words

Displaying items 61-90 of 421 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_53_curated_61
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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59392..60216
DNA (825bp) protein (275aa)
Variovorax paradoxus strain MEDvA23 contig_52, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27896.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KIQ27896.1};; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
Enoyl-CoA hydratase/isomerase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZM9_VARPE
enoyL-CoA hydratase/isomerase
SCNpilot_cont_300_bf_scaffold_53_curated_62
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60567..60881
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003771A5D
hypothetical protein
Variovorax paradoxus strain MEDvA23 contig_52, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27897.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
SCNpilot_cont_300_bf_scaffold_53_curated_63
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60903..62177)
DNA (1275bp) protein (425aa)
acyl-CoA dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI000362DC5D
acyL-CoA dehydrogenase type 2 domain
Acyl-CoA dehydrogenase type 2 domain {ECO:0000313|EMBL:ADU37835.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_cont_300_bf_scaffold_53_curated_64
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62244..63392)
DNA (1149bp) protein (383aa)
alanine racemase n=1 Tax=Variovorax paradoxus RepID=UPI0003728A7D
Putative amino acid aldolase or racemase {ECO:0000313|EMBL:EJL79999.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
alanine racemase domain-containing protein
SCNpilot_cont_300_bf_scaffold_53_curated_65
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63466..64317
DNA (852bp) protein (284aa)
Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. (strain 383) RepID=Q395B7_BURS3
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KGB92515.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_53_curated_66
unknown

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comp(64333..64458)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_53_curated_67
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64455..65027)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Pseudomonas chlororaphis RepID=UPI0002DCAA19
Uncharacterized protein {ECO:0000313|EMBL:AJZ60507.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_53_curated_68
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(65146..65835)
DNA (690bp) protein (230aa)
Transcriptional regulator n=1 Tax=Acidovorax sp. NO-1 RepID=H0C3I2_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EHL20803.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_53_curated_69
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65973..66956
DNA (984bp) protein (328aa)
Metapyrocatechase n=1 Tax=Burkholderia sp. YI23 RepID=G8MQH8_9BURK
Metapyrocatechase {ECO:0000313|EMBL:KGD89977.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
Metapyrocatechase
SCNpilot_cont_300_bf_scaffold_53_curated_70
Hyphomonas adhaerens, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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67003..67863
DNA (861bp) protein (287aa)
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase n=1 Tax=Burkholderia sp. YI23 RepID=G8MQH9_9BURK
2-keto-4-pentenoate hydratase {ECO:0000313|EMBL:KCZ86012.1}; TaxID=1280949 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas adhaerens MHS-3.;"
2-keto-4-pentenoate hydratase
SCNpilot_cont_300_bf_scaffold_53_curated_71
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67885..68199)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036B8E50
Uncharacterized protein {ECO:0000313|EMBL:EJL80000.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_53_curated_72
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68279..69721)
DNA (1443bp) protein (481aa)
indole acetimide hydrolase n=1 Tax=Variovorax paradoxus RepID=UPI00036A083A
putative indoleacetamide hydrolase
Putative indoleacetamide hydrolase {ECO:0000313|EMBL:AGU49519.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_53_curated_73
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69861..70868
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000365D967
putative ABC transporter, substrate-binding protein
Putative ABC transporter, substrate-binding protein {ECO:0000313|EMBL:AGU49520.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_53_curated_74
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70880..71731
DNA (852bp) protein (284aa)
mannosyltransferase n=1 Tax=Variovorax paradoxus RepID=UPI0003646A08
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGU49521.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_53_curated_75
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71728..72486
DNA (759bp) protein (253aa)
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI00036BCA31
ABC transporter, permease protein
ABC transporter, permease protein {ECO:0000313|EMBL:AGU49522.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_53_curated_76
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72465..73223
DNA (759bp) protein (253aa)
ABC transporter, permease protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XAF0_VARPD
ABC transporter, permease protein
ABC transporter, permease protein {ECO:0000313|EMBL:AGU49523.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_53_curated_77
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73223..73999
DNA (777bp) protein (259aa)
Putative aldolase, class 2 n=1 Tax=Variovorax paradoxus B4 RepID=T1XB22_VARPD
putative aldolase, class 2
Putative aldolase, class 2 {ECO:0000313|EMBL:AGU49524.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_53_curated_78
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74041..74880
DNA (840bp) protein (280aa)
taurine dioxygenase (EC:1.14.11.17)
Taurine dioxygenase {ECO:0000313|EMBL:AGU49525.1}; EC=1.14.11.17 {ECO:0000313|EMBL:AGU49525.1};; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
taurine dioxygenase n=1 Tax=Variovorax paradoxus RepID=UPI00035F2381
SCNpilot_cont_300_bf_scaffold_53_curated_79
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74956..75690
DNA (735bp) protein (245aa)
GntR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI000373FE49
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AGU49526.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_53_curated_80
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75750..76583
DNA (834bp) protein (278aa)
Putative oxidoreductase, SDR family n=1 Tax=Variovorax paradoxus B4 RepID=T1X9B4_VARPD
putative oxidoreductase, SDR family
Putative oxidoreductase, SDR family {ECO:0000313|EMBL:AGU49527.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_53_curated_81
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76580..77755
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000362C3AC
putative aminotransferase, class 1/class 2
Putative aminotransferase, class 1/class 2 {ECO:0000313|EMBL:AGU49528.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_53_curated_82
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77767..78648
DNA (882bp) protein (294aa)
alpha/beta hydrolase n=1 Tax=Variovorax paradoxus RepID=UPI000368A31E
alpha/beta hydrolase family protein
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:AGU49529.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_53_curated_83
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78651..79940
DNA (1290bp) protein (430aa)
allantoate amidohydrolase n=1 Tax=Variovorax paradoxus RepID=UPI000382BE12
putative N-carbamoyl-L-amino acid hydrolase
Putative N-carbamoyl-L-amino acid hydrolase {ECO:0000313|EMBL:AGU49530.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_53_curated_84
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79937..80872
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036C9105
cupin domain-containing protein
Cupin domain-containing protein {ECO:0000313|EMBL:AGU49531.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_53_curated_85
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80936..81202
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037DAB22
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU37832.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_cont_300_bf_scaffold_53_curated_86
unknown

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81261..81557
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_53_curated_87
unknown

Not on your lists

81628..81816
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_53_curated_88
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81957..82661
DNA (705bp) protein (235aa)
glutathione s-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase n=1 Tax=Variovorax sp. CF313 RepID=J2KDE3_9BURK
Glutathione S-transferase {ECO:0000313|EMBL:EJL71173.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
SCNpilot_cont_300_bf_scaffold_53_curated_89
unknown

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comp(84047..84463)
DNA (417bp) protein (139aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_53_curated_90
unknown

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comp(84806..85114)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000377852B
Displaying items 61-90 of 421 in total

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