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SCNpilot_cont_300_bf_scaffold_53_curated_64

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(62244..63392)

Top 3 Functional Annotations

Value Algorithm Source
alanine racemase n=1 Tax=Variovorax paradoxus RepID=UPI0003728A7D similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 383.0
  • Bit_score: 643
  • Evalue 1.40e-181
Putative amino acid aldolase or racemase {ECO:0000313|EMBL:EJL79999.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 380.0
  • Bit_score: 643
  • Evalue 2.60e-181
alanine racemase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 375.0
  • Bit_score: 606
  • Evalue 4.70e-171

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1149
ATGTTCCTGGACACGCAACCCAACGCGCCGCTGATCGGTGCGGCCAACGGCCGCCAACAGCTCGACACGCCCGCGCTGCTGATCGACCTGCCCGCCATGACGCGCAACATCGAACGCATGGCCGCCTTCGCCAAGTCGCGCGGCATCGGGCTGCGCCCGCACGTGAAGACGCACAAGTCGGTCGAGATCGCAAAGCGCCAGGTGGCGGCCGGCGCCATCGGCGTGAGCTGCGTCACGATGGGCGAGGCAGAAGTGATGGTCGAGGGCGGCATTCCGGGCGTGCTGATCACCTCGCCGGCCGTCACGCCGAGCAAGATCGCGCGCCTCGTCAAGCTCGCGCAGCGTGCCCGACCGGGCGACGTGATGGTGGTGGTCGACAACCCGCGCAACCTGGCCGACCTGGCGCAGGCCGCCGGCGCGCTGGCGCACCCGCTCGACGTGCTGGTGGACTACGGAGCGGGCTACAACCGCACCGGCGCCGCCACGCAGGCGCAGGTGCTGGAACTCGCCGCGCTGGTGGCGGCCGAGCCGCGCCTGCGGCTGCGCGGGTTGCAGTCGTATGCGGGCAACCTGCAGCACATCGTGGAGCGCGACAAGCGCAGCGCGGCTGCCGCAGGCCTGCGCGAGACCGTGGCGGGCATCGTCGCGGAGGCCGAACGCCAAGGCCTGCGCTTCGAGATCGTGACGGGCGCGGGCACCGGCACGCACGACCTCGACTCGCAGGAAAACGCCTTCACCGAACTGCAGGCCGGCTCTTATGTCTTCATGGACGCGGAGTACACGGGCGTGCTGACCTCGGGCGGACAGCCCTCGCCCTTCGAGGTGTCGCTGTTCGTGCAGACGGCCGTGGTCAGCGCCAACGCGGCGGAGTGGGTCACGGTCGATGGCGGCACCAAGTGCTTTTCGACCGACAGCGGCGCGCCGCTGGTGGCGCGCGGCGTGGATACCGCGACGAGCCGCTACGCCTTCTTCGGCGACGAGCACGGCAAGCTGCTGCTGCCCGCCGACGCACGGCCCGCGCTTGGCGCGCGCGTCGAGTTCGTCACGCCGCACTGCGACCCGACGGTCAACCTGCACGACGCGTACCACGTGGTCGAGGGCGACACGCTGGTCGCGATCTGGCCGGTGGATGCGCGCGGCAAGCGATAG
PROTEIN sequence
Length: 383
MFLDTQPNAPLIGAANGRQQLDTPALLIDLPAMTRNIERMAAFAKSRGIGLRPHVKTHKSVEIAKRQVAAGAIGVSCVTMGEAEVMVEGGIPGVLITSPAVTPSKIARLVKLAQRARPGDVMVVVDNPRNLADLAQAAGALAHPLDVLVDYGAGYNRTGAATQAQVLELAALVAAEPRLRLRGLQSYAGNLQHIVERDKRSAAAAGLRETVAGIVAEAERQGLRFEIVTGAGTGTHDLDSQENAFTELQAGSYVFMDAEYTGVLTSGGQPSPFEVSLFVQTAVVSANAAEWVTVDGGTKCFSTDSGAPLVARGVDTATSRYAFFGDEHGKLLLPADARPALGARVEFVTPHCDPTVNLHDAYHVVEGDTLVAIWPVDARGKR*