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SCNpilot_cont_300_bf_scaffold_53_curated_65

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 63466..64317

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. (strain 383) RepID=Q395B7_BURS3 similarity UNIREF
DB: UNIREF100
  • Identity: 74.2
  • Coverage: 283.0
  • Bit_score: 417
  • Evalue 1.20e-113
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KGB92515.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 283.0
  • Bit_score: 421
  • Evalue 9.20e-115
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 74.2
  • Coverage: 283.0
  • Bit_score: 417
  • Evalue 3.90e-114

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Taxonomy

Burkholderia cepacia → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 852
ATGAAGACTCTCGACATCGAGGCCGTGCAGGCCTTCATCCGCGTGGCCGACCTCAAGAGCTTCACGCGGGCCGCCGAGGCCATGGACAGTTCGCAGTCGGCCGTGAGCCTGAAGGTGAAGCGGCTCGAGGATGCGCTGGGCCGGCGCCTCCTCGAGCGCACGCCACGGCAGGTGCGGCTGTCCGCCGAAGGGCTGGCCTTTCTGCCGTCCGCGCGGCATCTGCTGGCCGCGCATGACGGCGCGCTCGACGCCTTCGGCACGCAGGCACGCCGGCTGGTGGTCGGCATCAGCCATCACATCGTGGGCGCCGAGCTGCCCTTGCTGCTGCGACGCATGAAGGACGCCGAGCCGCGCGTGGTGATGGAAATCCGCGTTTCCACATCGCGCGACCTGCTCGATGCCTTCGACCGCGGCGAGATCGACGCGGTCGTCATCCTGCGGCACGACAGCCGCCGGCTCGATGGAGAAGTGTTGCTCGAAGAGCAGTTCGGCTGGATGGCCGCGCCCGACTTCGTGCACCGCTCCGGCGAGCCGCTGCGGCTGGCCACGCAGGCCGAGCCCTGCAGCGTGCGCAGCATGGCCATCGCGACGCTTGCCGAAGGCGGCGTGCCCTGGACCGAAGTGTTCGTGGGTGGCGGCGTGTTGACGATCGGGGCGGCGGTGTCGGCGGGGCTTGCAGTGGCCGCGCTCGGGCGCCGCGTGGCGCCGCTCGGCACGGTCGACGTGGGCCCGGTGTTGGGTTTGCCGCCGTTGCCTTCGCGCGAGGTGGTGCTGCACACCGGCGTGTCCGACGCCCAGGCCCGCAGCGCACTGCGCACCCTGGCGGCGGCGATCCGTTCGACCGCCGCGTAG
PROTEIN sequence
Length: 284
MKTLDIEAVQAFIRVADLKSFTRAAEAMDSSQSAVSLKVKRLEDALGRRLLERTPRQVRLSAEGLAFLPSARHLLAAHDGALDAFGTQARRLVVGISHHIVGAELPLLLRRMKDAEPRVVMEIRVSTSRDLLDAFDRGEIDAVVILRHDSRRLDGEVLLEEQFGWMAAPDFVHRSGEPLRLATQAEPCSVRSMAIATLAEGGVPWTEVFVGGGVLTIGAAVSAGLAVAALGRRVAPLGTVDVGPVLGLPPLPSREVVLHTGVSDAQARSALRTLAAAIRSTAA*