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SCNpilot_cont_300_bf_scaffold_53_curated_55

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(53827..54708)

Top 3 Functional Annotations

Value Algorithm Source
Putative acyl-CoA transferase/carnitine dehydratase n=1 Tax=Variovorax sp. CF313 RepID=J2L425_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 293.0
  • Bit_score: 519
  • Evalue 1.80e-144
Putative acyl-CoA transferase/carnitine dehydratase {ECO:0000313|EMBL:EJL79993.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 293.0
  • Bit_score: 519
  • Evalue 2.60e-144
L-carnitine dehydratase/bile acid-inducible protein f similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 283.0
  • Bit_score: 486
  • Evalue 7.00e-135

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGCCGAATTCCACAAGCCCCTCCGACGATCACGCCGCACCGCTGGAGGGCGTGCGCGTGCTGAGCCTCGCGCTGAACCTGCCCGGCCCGGCCGCGCTGCTTCGCTGCCGCGGCATGGGCGCAGCCTGCCTCAAGCTGGAGCCACCCGGCGGCGATCCGATGGCGCTGTACAACCGGCCGGCCTATGCGGCGCTGCACGAGGGCATCGAGATTCGCGCCGTCGACCTGAAGAGCGAAGCCGGCCAACAGCAGCTGCATACCGAACTCGCGTCGACCGACGTGCTGCTGACCTCGTTCCGCCCCTCGGCACTGGCCAAGCTCGGTCTCGACTGGCCGGCGCTGCATGGGCGCTATCCGGGGCTGTCGCAGGTGGCCATCGTCGGCGCCCCGGGCGAACGCGCCGAAGAGCCGGGTCACGACCTGACCTACCTCGCGGAAAGCGGACTCGTCACCGGCACCGATCTGCCACCCACGCTCTACGCCGACATGGGCGGCGCCCTGCTCGCGAGCGAAGCAGTGCTCAAGGCCATGCTGCTGCGCTCACGCAAGGCGGACGGCGTGTACCTCGAAGTCGCCCTGAACGCATCGGCCGACTGGCTCGCCCTGCCCCGCACCTGGGGCCTGACGCAGCCTTCGGGCGCTGTAGGCGGCGCGCATGCGGGCTACCGGGTCTACCCTTGCGCCGACGGCCGCGTGGCCGTGGCCGCGCTGGAGCCGCATTTCGCGGCCCGGCTCTGCGAGGCTGCCGAGATCGCCTCGCGCGACATGATGGCGCCGGCCACGCACGAGGCGCTGGCCAGCTGGCTGGCGACGCGCACCCGCGCCGAACTCGAAGCCATGGGCCGCGAGCGCGACGTGCCGCTGCTCACGCTGGCCGATTGA
PROTEIN sequence
Length: 294
MPNSTSPSDDHAAPLEGVRVLSLALNLPGPAALLRCRGMGAACLKLEPPGGDPMALYNRPAYAALHEGIEIRAVDLKSEAGQQQLHTELASTDVLLTSFRPSALAKLGLDWPALHGRYPGLSQVAIVGAPGERAEEPGHDLTYLAESGLVTGTDLPPTLYADMGGALLASEAVLKAMLLRSRKADGVYLEVALNASADWLALPRTWGLTQPSGAVGGAHAGYRVYPCADGRVAVAALEPHFAARLCEAAEIASRDMMAPATHEALASWLATRTRAELEAMGRERDVPLLTLAD*