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SCNpilot_cont_300_bf_scaffold_53_curated_117

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(112094..112363)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L31 n=1 Tax=Variovorax paradoxus RepID=UPI000373867A similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 89.0
  • Bit_score: 185
  • Evalue 3.30e-44
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 similarity KEGG
DB: KEGG
  • Identity: 97.8
  • Coverage: 89.0
  • Bit_score: 184
  • Evalue 1.30e-44
50S ribosomal protein L31 {ECO:0000256|RuleBase:RU000564}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 89.0
  • Bit_score: 184
  • Evalue 6.00e-44

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGGCAAAAGAAGGCATCCACCCGAATTACCGCGAAGTTCTGTTCGTCGACATGTCGAACGGCTTCAAGTTCGTGACCCGTTCGTGCGCGAACACCAAGGAAATGGGCAAGACCGAAGACGGCCGCGAGCTCCCCCTGTTCAAGCTGGACACCACCAGCGAATCGCATCCCTTCTACACCGGCACCCAGAAGTCGGTCGACAACATGGGCGGTCGCGTCGAGAAGTTCCGCAACCGCTTCGGCAAGACCACCGGCGCCGCTTCGAAGTAA
PROTEIN sequence
Length: 90
MAKEGIHPNYREVLFVDMSNGFKFVTRSCANTKEMGKTEDGRELPLFKLDTTSESHPFYTGTQKSVDNMGGRVEKFRNRFGKTTGAASK*