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SCNpilot_cont_300_bf_scaffold_53_curated_128

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 126452..127489

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000367CB9A similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 345.0
  • Bit_score: 657
  • Evalue 6.60e-186
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:EJL71200.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 345.0
  • Bit_score: 654
  • Evalue 1.00e-184
hypothetical protein; K02051 NitT/TauT family transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 345.0
  • Bit_score: 641
  • Evalue 1.50e-181

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1038
ATGCTCCATCGCCGCACCCTCATTTCCGCCTCCGCCATTGCCGCCGCAACCATCGCGTTGCCGCGCGTCTTTGCGCAGCAGGCGAAGCTGGAGAAGACCAAGGTCTCCATCGCGGTGGGCGGCAAGGCGGCGTTCTACTACCTGCCGCTGACCATCTCCGAGCAGCTCGGCTATTTCAAGGCCGAGGGGCTGGACGTGGAAATCTCCGACTTCGCCGGCGGCGCGCGCGCGTTGCAGGCCGTGGTCGGCGGCTCGGCCGACGTCTGCTCCGGCGCCTACGAACACACCATCAACCTGCAGGCCAAGAACCAGTTCTTCCAGGCCTTCGTGCTGCAGGGCCGCGCACCGCAGATCGCGGTGGGCGTGTCGACCAAGAACATGGCCGGCTATACCGGCATCCAGGATCTCAAGGGGAAGAAGATCGGCGTCTCGGCACCGGGCTCGTCGACCAACATGGTGGCCAACCTCGTGCTGTCGCGCGGCGGTCTCAAGGCCAGCGACGTGAGCTACATCGGCGTGGGCGTGGCGGCCGGTGCGCTCACCGCGTTGCGCTCGGGGCAGATCGACGCCATCAGCAACACCGATCCGGTGATGACGATGCTCGAGCAGAAAGGTGACGTGAAGATCATCAGCGACACGCGCACGCTCAAGGGCACGCAGCAGGTGTTCGGCGGCACGATGCCGGCGGCCTGCCTGTATGCGTCGACCGAGTTCATCCAGAAGAATCCGAACACCTGCCAGGCGCTGGCGAATGCCATCGTGCACGGCCTGAAATGGCTGCAGACGGCGGGGCCGGGCGACATCATCAAGACGGTGCCGGAGACCTACCTGCTGGGCGACCGCGCGCTGTACCTCGCTTCTTTCGACAAGGTGCGCGAGTCGATCGCGACAGACGGCCTGGTGCCGGCCGACGGCCCCAAGACCGCGCTCACCGCGATCGCCAGCTTCGACAACACCGTGAAGGCCGACAAGATCGACCTCGCCAAGACCTACACCAACGATTTTGCCCGGCGCGCGAAAGACAGGTTCAAAGCCTGA
PROTEIN sequence
Length: 346
MLHRRTLISASAIAAATIALPRVFAQQAKLEKTKVSIAVGGKAAFYYLPLTISEQLGYFKAEGLDVEISDFAGGARALQAVVGGSADVCSGAYEHTINLQAKNQFFQAFVLQGRAPQIAVGVSTKNMAGYTGIQDLKGKKIGVSAPGSSTNMVANLVLSRGGLKASDVSYIGVGVAAGALTALRSGQIDAISNTDPVMTMLEQKGDVKIISDTRTLKGTQQVFGGTMPAACLYASTEFIQKNPNTCQALANAIVHGLKWLQTAGPGDIIKTVPETYLLGDRALYLASFDKVRESIATDGLVPADGPKTALTAIASFDNTVKADKIDLAKTYTNDFARRAKDRFKA*