ggKbase home page

SCNpilot_cont_300_bf_scaffold_53_curated_135

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 133620..134102

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 149.0
  • Bit_score: 306
  • Evalue 1.90e-80
ribonuclease h (EC:3.1.26.4); K03469 ribonuclease HI [EC:3.1.26.4] similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 149.0
  • Bit_score: 305
  • Evalue 9.30e-81
Ribonuclease H n=1 Tax=Variovorax sp. CF313 RepID=J2SZU9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 149.0
  • Bit_score: 306
  • Evalue 1.30e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 483
ATGGACGAATCGAATGAAGAAGGAAAAGTCAGTTTGACCGAAGTCGTGATCTATACCGATGGCGCCTGCAAGGGCAACCCGGGCCCCGGGGGCTGGGGCGCGTGGCTCAAGTCGGGCACCACCGAAAAAGACCTGTTCGGCGGTGAACTCAACACCACCAACAACCGCATGGAGCTGACCGCCGTCATCGAAGGCCTGGCCGCGCTCAAGCGGCCGTGCAAGGTGCTGCTGTACCTCGACAGCCAGTACGTGCGCAAGGGCATCACCGAATGGATACGCGGCTGGAAGGCCAAGGGCTGGGTCACGGCCAGCAAGCAACCGGTGAAGAACGTCGAACTCTGGCAGCGATTGGACAAGCTGGTGACCGAGGGCGGCCACCAGATCGAGTGGCGCTGGGTGAAGGGCCACTCGGGCGACCCCGGCAACGAGCGCGCCGACATGCTGGCCAACAAAGGCGTCGACAAGGCGCTCGGGCGACTCTGA
PROTEIN sequence
Length: 161
MDESNEEGKVSLTEVVIYTDGACKGNPGPGGWGAWLKSGTTEKDLFGGELNTTNNRMELTAVIEGLAALKRPCKVLLYLDSQYVRKGITEWIRGWKAKGWVTASKQPVKNVELWQRLDKLVTEGGHQIEWRWVKGHSGDPGNERADMLANKGVDKALGRL*