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SCNpilot_cont_300_bf_scaffold_84_curated_71

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 68215..69219

Top 3 Functional Annotations

Value Algorithm Source
Variovorax paradoxus strain MEDvA23 contig_119, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ17824.1}; EC=1.1.1.157 {ECO:0000313|EMBL:KIQ17824.1};; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.7
  • Coverage: 332.0
  • Bit_score: 612
  • Evalue 3.30e-172
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Variovorax sp. CF313 RepID=J3CS80_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 91.6
  • Coverage: 334.0
  • Bit_score: 611
  • Evalue 4.00e-172
putative 3-hydroxybutyryl-CoA dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 334.0
  • Bit_score: 606
  • Evalue 7.00e-171

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
ATGGCGAATGAGGCCGCACTGCCGCGATTCGCCGCCGTCGGCGCGGGCCGCATGGGGCGGGGCATCGCCATCGCGTTCGCCTATGCCGGGCACCGCATCTCGCTGATCGACCTGCGCCCGCGCGGCGCCGAAGCCTGGCAGCGTCTGCTCGACGAAGCCAAGGCCGAAATCGAAGCCAGCCTCTCGGGCCTGGCGCAGCTTGGCGTGATCGACGCAGCGCAGATCGAGCGCATCGCCGCGCGCGTGGATTTCGTCGATGCCGCGGCCGCACCTCGCGCGCTGGCCGCTGCCGAACTCGTGTTCGAGGGCGTGCCCGAAACCATCGAAGCCAAGCGCGAAGCCTTCGAGCACATCAACCGCCATTGCCGCGACGACGCCATCCTCACCTCGACCACCAGCAGCATCCTGGTAACGCAGCTGGCCGCGTTCGTGAGGCTGCCAGAGCGCTTCCTCAACATGCACTGGCTCAACCCCGCCTATGTGATCCCGGTGGTGGAGCTGAGCTGCCATCCCGGCACCGATGCCGCCGTGCTCGCTCGCACCAAGGCGCTGATGGAGCAGATCGGCAAGCTGCCCGTGGTCTGCGGTGCGTCGCCCGGATACATCGTGCCGCGCCTGCAGGCGCTGGTGATGAACGAGGCAGCCCGCATGATCGAGGAGGGCGCCGCCACCGCCGAGGAAATCGACAAGGCCACGCGCTACGGCCTGGGCCTTCGCTTCGCGGCGCTGGGCGTGGTCGAGTTCATCGACTTCGGCGGCTGCGACATCCTGCACCATGCGAGCCGCGAGATGTCGGCATCGCTCGACAAGGGGCGCTACACGGCGCCCGCCATCGTCGGGCGCATGGTCGAGGAGGGGCGGCTGGGCCTGAAGAGCGGCAGCGGCTTCTACGACTATGAAGGCCGCGACATCGGTGCCTATCGGCGCGACGTGCTGTCGCGCACGCTCGGCGAACTGCGACATGCGGGCCTGTGGCGCGCACCCGCCGACGAGACGCAGCCATGA
PROTEIN sequence
Length: 335
MANEAALPRFAAVGAGRMGRGIAIAFAYAGHRISLIDLRPRGAEAWQRLLDEAKAEIEASLSGLAQLGVIDAAQIERIAARVDFVDAAAAPRALAAAELVFEGVPETIEAKREAFEHINRHCRDDAILTSTTSSILVTQLAAFVRLPERFLNMHWLNPAYVIPVVELSCHPGTDAAVLARTKALMEQIGKLPVVCGASPGYIVPRLQALVMNEAARMIEEGAATAEEIDKATRYGLGLRFAALGVVEFIDFGGCDILHHASREMSASLDKGRYTAPAIVGRMVEEGRLGLKSGSGFYDYEGRDIGAYRRDVLSRTLGELRHAGLWRAPADETQP*