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SCNpilot_cont_300_bf_scaffold_84_curated_80

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 78111..79739

Top 3 Functional Annotations

Value Algorithm Source
crotonobetaine/carnitine-CoA ligase n=1 Tax=Variovorax paradoxus RepID=UPI000362C14D similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 540.0
  • Bit_score: 1022
  • Evalue 1.60e-295
Variovorax paradoxus strain MEDvA23 contig_119, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ17816.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 540.0
  • Bit_score: 1012
  • Evalue 3.00e-292
putative CoA-ligase similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 540.0
  • Bit_score: 1009
  • Evalue 3.40e-292

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1629
ATGCCACACGCCACCGTCCATCAAGTCTTCGCGGCCACCGCGGCGCGCACGCCGCAGGCCGAGTTCCTGTTCACCGAATCGGTGACGGCCGCCGCCTACGGCATCGAAGCGGGCGCCATCCGCTGGGGCGATGCCGCCGGGCGGATTGAGCGCCTGCGCGCCGCCTACGCGCAGGCCGGCTATGGTCACGGCCACCGCGTCGGCCTGTTGCTGGAGAACCGGCCCGCCTTCATCTTCCACTGGCTCGCGCTGAACGCGCTGGGCGTGAGCGTGGTGCCGATCAACGCGGAGATGCGCTCGGCCGAGCTGGTCTACCTGATCGGCCACAGCGAGATCGGGCTGGCCGTGACGCTGCAGGAGCGCGCCGCGGACCTGCGTGCGGCGGCTGCCCAGGCGGGCATCGAGTTCGAGACGATGGGCCCCGACGATGCGGTGCCTCCGGCGAGGACGCCAGCGCCACGCGCGCACGAGCCGGTCGGCACCGACACCGAATGCGGCCTGCTCTACACCTCGGGCACCACGGGCCGGCCCAAGGGCTGCATCCTGAGCAATGCCTACTTCCTGCGCGCTGGCGAGTGGTATGCCGCGCTGGACGGCGTGTGCAGCATCCGCCCGGACAAGGAGCGCGTCATCACGCCGCTGCCGCTCAACCACATGAACGCGATGGCCTTCTCCACCATGGTGGTGCTGGTCGCGGGCGGCTGTCTGGTGCAGCTCGATCGCTTCCATCCGAAGACCTGGCTGGCGAGCGCGAAGGAGAGCGGCGCGACCATCGTTCACTACCTGGGCGTGATGCCGGCGATGCTGCTGTCCGCGCCCGCGTCGGCGGCAGACCGCGACCATGCCATCCGCTGGGGCTTCGGCGCCGGTGTTGATCGCAAGAACCACGCGCCCTTCGAGGAGCGCTTCGGCTTCCCGCTGGTCGAGGCCTGGGCCATGACCGAGACCGGCGCGGCCGCCTGCATCATGGCCAACCGCGAGCCTCGGCTGGTGGGCACCAGCTGCTTCGGCCGCCAGGAAGACTTCGTCGAGATCCGCCTCGTGGGCGAGGACGGCGGGGACGCAGCCGTCGATGCGCCGGGCGAACTGCTGGTGCGATCGGCCGGCTCCGACCCGAGGCGCTATTTCTTCTCCGGCTATCTCAAGGACGAGGAAGCCACCCGCGAAGCCTGGGCCGATGGCTGGTTCCATACCGGCGATCTGGTGCGCCGCGACGCGCAGGGCAACTTCTTCTTCGTCGATCGCAAGAAGAACGTGATCCGCCGCAGCGGAGAGAACATCTCCGCCGTCGAGGTCGAGAGCGTGCTCAACCAGCATCCGGCCGTGAAGGCATCCGCCGTGGCCGCCACGCCCGACGCCGTGCGCGGCGACGAGGTGCTGGCATGCGTCGTGATGCGCGAAGACGCCGGCGCGGTGCATCCCGAACAGATCGCGGCGAGCATCGTCCAGCATGCGCTGGCGCAGCTCGCCTACTACAAGGCGCCGGGCTACGTTGCCTTCGTCGACGCGCTGCCGCTCACGCCGTCACAGAAGATCCAGCGTGGGCAACTGCGCGAGATGGCCCGGGCGCTGCCCGGCCAGGGCCATTGCATCGACACGCGCGCCATGAAGAAGAGGCAGCAGCCATGA
PROTEIN sequence
Length: 543
MPHATVHQVFAATAARTPQAEFLFTESVTAAAYGIEAGAIRWGDAAGRIERLRAAYAQAGYGHGHRVGLLLENRPAFIFHWLALNALGVSVVPINAEMRSAELVYLIGHSEIGLAVTLQERAADLRAAAAQAGIEFETMGPDDAVPPARTPAPRAHEPVGTDTECGLLYTSGTTGRPKGCILSNAYFLRAGEWYAALDGVCSIRPDKERVITPLPLNHMNAMAFSTMVVLVAGGCLVQLDRFHPKTWLASAKESGATIVHYLGVMPAMLLSAPASAADRDHAIRWGFGAGVDRKNHAPFEERFGFPLVEAWAMTETGAAACIMANREPRLVGTSCFGRQEDFVEIRLVGEDGGDAAVDAPGELLVRSAGSDPRRYFFSGYLKDEEATREAWADGWFHTGDLVRRDAQGNFFFVDRKKNVIRRSGENISAVEVESVLNQHPAVKASAVAATPDAVRGDEVLACVVMREDAGAVHPEQIAASIVQHALAQLAYYKAPGYVAFVDALPLTPSQKIQRGQLREMARALPGQGHCIDTRAMKKRQQP*