ggKbase home page

SCNpilot_cont_300_bf_scaffold_84_curated_129

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(134056..134391)

Top 3 Functional Annotations

Value Algorithm Source
UPF0060 membrane protein WQQ_04550 n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T958_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 108.0
  • Bit_score: 188
  • Evalue 4.80e-45
UPF0060 membrane protein RT97_26805 {ECO:0000256|HAMAP-Rule:MF_00010}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 111.0
  • Bit_score: 225
  • Evalue 2.90e-56
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 108.0
  • Bit_score: 179
  • Evalue 7.00e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGGAAGTGCTCAAGACCCTCTCTCTTTTTGTCGTGACGGCACTGGCGGAAATTGTCGGCTGCTATCTACCCTACCTCTGGCTGAAGCAAGATCGCTCGGCTTGGCTGCTGGTGCCTGCCGGGATAGCGTTGGCGCTCTTTGCCTGGCTGCTTTCGTTACACCCTGCGGCGGCCGGCCGTGTCTATGCCGCCTACGGTGGCGTCTACATCGGCGTGGCCATCCTGTGGCTTTGGTCGGTGGACGGCATCCGGCCGACCACGACCGATTGGATAGGCGTTGCTGTGAGTCTCGCCGGCATGGCGATCATCATGTTCGGCCCGCGGCCCACCGCCTAG
PROTEIN sequence
Length: 112
MEVLKTLSLFVVTALAEIVGCYLPYLWLKQDRSAWLLVPAGIALALFAWLLSLHPAAAGRVYAAYGGVYIGVAILWLWSVDGIRPTTTDWIGVAVSLAGMAIIMFGPRPTA*