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SCNpilot_cont_300_bf_scaffold_84_curated

Search features with annotation key words

Displaying items 121-150 of 197 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_84_curated_121
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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128622..128945
DNA (324bp) protein (108aa)
Transcriptional regulator, ArsR family n=1 Tax=Variovorax paradoxus B4 RepID=T1X9P8_VARPD
transcriptional regulator, ArsR family
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AGU49196.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_84_curated_122
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128957..129436
DNA (480bp) protein (160aa)
h16_A2179; lactoylglutathione lyase (EC:4.4.1.5); K01759 lactoylglutathione lyase [EC:4.4.1.5]
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Burkholderia sp. H160 RepID=B5WGJ2_9BURK
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EEA02471.1}; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H160.;"
SCNpilot_cont_300_bf_scaffold_84_curated_123
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

129577..129948
DNA (372bp) protein (124aa)
Putative GCN5-like N-acetyltransferase n=1 Tax=Variovorax paradoxus B4 RepID=T1X855_VARPD
putative GCN5-like N-acetyltransferase
Putative GCN5-like N-acetyltransferase {ECO:0000313|EMBL:AGU49092.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_84_curated_124
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

129941..130450
DNA (510bp) protein (170aa)
Putative arsenate reductase n=1 Tax=Variovorax paradoxus B4 RepID=T1X9H8_VARPD
putative arsenate reductase
Putative arsenate reductase {ECO:0000313|EMBL:AGU49198.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_84_curated_125
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130447..130935
DNA (489bp) protein (163aa)
ArsC family transcriptional regulator n=1 Tax=Ralstonia sp. AU12-08 RepID=S9RXQ8_9RALS
ArsC family transcriptional regulator {ECO:0000313|EMBL:EPX96652.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
Protein-tyrosine phosphatase, low molecular weight
SCNpilot_cont_300_bf_scaffold_84_curated_126
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130940..131998
DNA (1059bp) protein (353aa)
Putative sodium bile acid symporter family protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IET5_BORPD
sodium bile acid symporter family protein; K03325 arsenite transporter, ACR3 family
Putative sodium bile acid symporter family protein {ECO:0000313|EMBL:CAP44902.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCNpilot_cont_300_bf_scaffold_84_curated_127
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

131988..132701
DNA (714bp) protein (238aa)
Putative arsenical resistance protein ArsH n=1 Tax=Variovorax paradoxus B4 RepID=T1X995_VARPD
arsH1; putative arsenical resistance protein ArsH
Putative arsenical resistance protein ArsH {ECO:0000313|EMBL:AGU49098.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_84_curated_128
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132718..133917
DNA (1200bp) protein (400aa)
Putative transporter, MFS-type n=1 Tax=Variovorax paradoxus B4 RepID=T1X9X2_VARPD
putative transporter, MFS-type
Putative transporter, MFS-type {ECO:0000313|EMBL:AGU49099.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_84_curated_129
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134056..134391)
DNA (336bp) protein (112aa)
UPF0060 membrane protein WQQ_04550 n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T958_9GAMM
UPF0060 membrane protein RT97_26805 {ECO:0000256|HAMAP-Rule:MF_00010}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_84_curated_130
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135820..136215)
DNA (396bp) protein (132aa)
Transcriptional regulator, MerR family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9N7_ALIDK
MerR family transcriptional regulator; K08365 MerR family transcriptional regulator, mercuric resistance operon regulatory protein
Transcriptional regulator, MerR family {ECO:0000313|EMBL:AEB84537.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_cont_300_bf_scaffold_84_curated_131
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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136287..136628
DNA (342bp) protein (114aa)
Mercuric transport protein MerT n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9N6_ALIDK
Mercury transporter MerT {ECO:0000313|EMBL:KIL02515.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
Mercuric transport protein MerT; K08363 mercuric ion transport protein
SCNpilot_cont_300_bf_scaffold_84_curated_132
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136639..136917
DNA (279bp) protein (93aa)
Mercuric transport protein periplasmic component n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9N5_ALIDK
Periplasmic mercury ion-binding protein {ECO:0000256|RuleBase:RU361212}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
mercuric transport protein periplasmic component; K08364 periplasmic mercuric ion binding protein
SCNpilot_cont_300_bf_scaffold_84_curated_133
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136914..137144
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9N4_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB84534.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_cont_300_bf_scaffold_84_curated_134
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137310..139259)
DNA (1950bp) protein (650aa)
Iron permease FTR1 n=2 Tax=Delftia acidovorans RepID=A9BR70_DELAS
Iron permease {ECO:0000313|EMBL:KEH09222.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
iron permease FTR1; K07243 high-affinity iron transporter
SCNpilot_cont_300_bf_scaffold_84_curated_135
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139389..142319)
DNA (2931bp) protein (977aa)
heavy metal translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Cadmium-translocating P-type ATPase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XIB8_DELAC
Cadmium-translocating P-type ATPase {ECO:0000313|EMBL:EPD44957.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
SCNpilot_cont_300_bf_scaffold_84_curated_136
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142508..142912
DNA (405bp) protein (135aa)
MerR family transcriptional regulator n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RVI6_COMTE
MerR family transcriptional regulator {ECO:0000313|EMBL:KGG82325.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
MerR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_84_curated_137

Not on your lists

143453..146095
DNA (2643bp) protein (881aa)
cation transport ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Heavy metal translocating P-type ATPase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5K0_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:KKO01624.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_cont_300_bf_scaffold_84_curated_138
unknown

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comp(146149..146388)
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_84_curated_139
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146431..147246)
DNA (816bp) protein (272aa)
Cobalt-zinc-cadmium resistance protein CzcD (Cation efflux system protein czcD) n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G5H6_HERAR
Variovorax paradoxus strain MEDvA23 contig_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36826.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
czcD; cobalt-zinc-cadmium resistance protein czcD; K03295 cation efflux system protein, CDF family
SCNpilot_cont_300_bf_scaffold_84_curated_140
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(147847..148185)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5K2_ACIDE
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EER60243.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
nitrogen regulatory protein P-II
SCNpilot_cont_300_bf_scaffold_84_curated_141
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148182..151307)
DNA (3126bp) protein (1042aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5K3_ACIDE
Cation efflux system protein CzcA {ECO:0000313|EMBL:EWS56824.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
heavy metal efflux pump, CzcA family; K15726 cobalt-zinc-cadmium resistance protein CzcA
SCNpilot_cont_300_bf_scaffold_84_curated_142
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151325..152542)
DNA (1218bp) protein (406aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5K4_ACIDE
Cation efflux system protein CzcB {ECO:0000313|EMBL:EWS61988.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
secretion protein HlyD; K15727 cobalt-zinc-cadmium resistance protein CzcB
SCNpilot_cont_300_bf_scaffold_84_curated_143
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152539..153858)
DNA (1320bp) protein (440aa)
Outer membrane efflux protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5K5_ACIDE
Outer membrane efflux protein {ECO:0000313|EMBL:EER60246.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
Outer membrane efflux protein; K15725 cobalt-zinc-cadmium resistance protein CzcC
SCNpilot_cont_300_bf_scaffold_84_curated_144
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(154755..156170)
DNA (1416bp) protein (472aa)
Phosphoethanolamine transferase EptA {ECO:0000313|EMBL:EWS56819.1}; EC=2.7.-.- {ECO:0000313|EMBL:EWS56819.1};; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
Phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W717_ACISJ
phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase
SCNpilot_cont_300_bf_scaffold_84_curated_145
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

156685..157368
DNA (684bp) protein (228aa)
Heavy metal response regulator n=1 Tax=Variovorax sp. CF313 RepID=J2L499_9BURK
Heavy metal response regulator {ECO:0000313|EMBL:EJL80028.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
DNA-binding heavy metal response regulator
SCNpilot_cont_300_bf_scaffold_84_curated_146
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

157365..158693
DNA (1329bp) protein (443aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
heavy metal sensor signal transduction histidine kinase; K07644 two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
Heavy metal sensor kinase n=1 Tax=Variovorax sp. CF313 RepID=J3CWQ9_9BURK
SCNpilot_cont_300_bf_scaffold_84_curated_147
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159501..159926)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2TN37_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL80032.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_84_curated_148
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160045..160464)
DNA (420bp) protein (140aa)
hypothetical protein id=12551654 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
SCNpilot_cont_300_bf_scaffold_84_curated_149
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160531..163779)
DNA (3249bp) protein (1083aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V615_VARPE
Cation transporter {ECO:0000313|EMBL:EYC50051.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
CzcA family heavy metal efflux pump; K15726 cobalt-zinc-cadmium resistance protein CzcA
SCNpilot_cont_300_bf_scaffold_84_curated_150
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(163792..165387)
DNA (1596bp) protein (532aa)
RND family efflux transporter MFP subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYT5_9BURK
Hemolysin D {ECO:0000313|EMBL:EYC50050.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
RND family efflux transporter MFP subunit
Displaying items 121-150 of 197 in total

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