ggKbase home page

SCNpilot_cont_300_bf_scaffold_84_curated

Search features with annotation key words

Displaying items 151-180 of 197 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_84_curated_151
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(165397..166485)
DNA (1089bp) protein (363aa)
Outer membrane protein n=1 Tax=Variovorax sp. CF313 RepID=J2KN38_9BURK
Cobalt-zinc-cadmium resistance protein {ECO:0000313|EMBL:EYC50049.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
outer membrane efflux protein; K15725 cobalt-zinc-cadmium resistance protein CzcC
SCNpilot_cont_300_bf_scaffold_84_curated_152
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(167778..168032)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q126Y5_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE45407.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
SCNpilot_cont_300_bf_scaffold_84_curated_153
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(168075..168404)
DNA (330bp) protein (110aa)
Nitrogen regulatory protein P-II n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q126Y6_POLSJ
nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:ABE45406.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
SCNpilot_cont_300_bf_scaffold_84_curated_154
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(168693..169151)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BR59_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX33117.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_cont_300_bf_scaffold_84_curated_155
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169262..169555)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I788_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_cont_300_bf_scaffold_84_curated_156
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169645..169950)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X427_DELAC
Uncharacterized protein {ECO:0000313|EMBL:KEH09216.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_84_curated_157
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(170374..173538)
DNA (3165bp) protein (1055aa)
Heavy metal efflux pump CzcA n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q126Z3_POLSJ
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:ABE45399.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
heavy metal efflux pump CzcA; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA
SCNpilot_cont_300_bf_scaffold_84_curated_158
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(173535..175238)
DNA (1704bp) protein (568aa)
Cu(I)/Ag(I) efflux system membrane protein CusB n=2 Tax=Bacteria RepID=S2XIB2_DELAC
Secretion protein HlyD {ECO:0000313|EMBL:KEH09217.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
RND family efflux transporter MFP subunit; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB
SCNpilot_cont_300_bf_scaffold_84_curated_159
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(175235..176590)
DNA (1356bp) protein (452aa)
Outer membrane protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WMI1_9BURK
Outer membrane protein {ECO:0000313|EMBL:EHR73146.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
putative outer membrane cation efflux protein
SCNpilot_cont_300_bf_scaffold_84_curated_160
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(176728..177174)
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WMI2_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR73147.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_84_curated_161
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(177438..177887)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2TN37_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL80032.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_84_curated_162
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

178834..180645
DNA (1812bp) protein (604aa)
Copper resistance transmembrane protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VSZ1_9GAMM
CopA family copper-resistance protein {ECO:0000313|EMBL:KFC63470.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
copper-resistance protein, CopA family
SCNpilot_cont_300_bf_scaffold_84_curated_163
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

180921..181838
DNA (918bp) protein (306aa)
Uncharacterized protein involved in copper resistance n=1 Tax=Rhodanobacter denitrificans RepID=M4NGR0_9GAMM
uncharacterized protein involved in copper resistance
Uncharacterized protein involved in copper resistance {ECO:0000313|EMBL:AGG88843.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_300_bf_scaffold_84_curated_164
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

181851..182390
DNA (540bp) protein (180aa)
Cytochrome c family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WGI5_9GAMM
Cytochrome C {ECO:0000313|EMBL:AHX13355.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
ketosteroid isomerase-like enzyme
SCNpilot_cont_300_bf_scaffold_84_curated_165
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

182593..182931
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I788_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44836.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_cont_300_bf_scaffold_84_curated_166
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

183070..183399
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X6W1_VARPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU48201.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_84_curated_167
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(183478..184764)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=3 Tax=Comamonadaceae RepID=A1W9A0_ACISJ
Type II site-specific deoxyribonuclease {ECO:0000313|EMBL:GAO24069.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_84_curated_168
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

184951..186594
DNA (1644bp) protein (548aa)
Filamentation induced by cAMP protein Fic n=2 Tax=Variovorax paradoxus RepID=C5CNN7_VARPS
filamentation induced by cAMP protein Fic
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:ACS17653.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_300_bf_scaffold_84_curated_169
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(186639..188036)
DNA (1398bp) protein (466aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
heavy metal sensor signal transduction histidine kinase; K07644 two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
Heavy metal sensor kinase n=1 Tax=Variovorax sp. CF313 RepID=J3CWQ9_9BURK
SCNpilot_cont_300_bf_scaffold_84_curated_170
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(188033..188716)
DNA (684bp) protein (228aa)
Heavy metal response regulator n=1 Tax=Variovorax sp. CF313 RepID=J2L499_9BURK
Heavy metal response regulator {ECO:0000313|EMBL:EJL80028.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
winged helix family two component heavy metal response transcriptional regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
SCNpilot_cont_300_bf_scaffold_84_curated_171
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

188908..189303
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2TN32_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL80027.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
SCNpilot_cont_300_bf_scaffold_84_curated_172
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

189371..189796
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CX48_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL80026.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_84_curated_173
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

189913..190284
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2KIN9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL80025.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_84_curated_174
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

190281..191705
DNA (1425bp) protein (475aa)
Outer membrane protein n=1 Tax=Variovorax sp. CF313 RepID=J3CWQ6_9BURK
Outer membrane protein {ECO:0000313|EMBL:EJL80024.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative copper resistance-like lipoprotein
SCNpilot_cont_300_bf_scaffold_84_curated_175
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

191741..193156
DNA (1416bp) protein (472aa)
Putative multicopper oxidase n=1 Tax=Variovorax sp. CF313 RepID=J2L493_9BURK
Putative multicopper oxidase {ECO:0000313|EMBL:EJL80023.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
multicopper oxidase
SCNpilot_cont_300_bf_scaffold_84_curated_176
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

193203..193694
DNA (492bp) protein (164aa)
Putative copper-binding protein n=1 Tax=Variovorax sp. CF313 RepID=J2TN28_9BURK
Putative copper-binding protein {ECO:0000313|EMBL:EJL80022.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative copper-binding protein
SCNpilot_cont_300_bf_scaffold_84_curated_177
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

193770..194144
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CX45_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL80021.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_84_curated_178
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

194194..195006
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003665E75
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
SCNpilot_cont_300_bf_scaffold_84_curated_179
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

195542..196201
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WTY7_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD41525.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
putative cytochrome c
SCNpilot_cont_300_bf_scaffold_84_curated_180
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

196637..198652
DNA (2016bp) protein (672aa)
UPI0003D069E4 related cluster n=1 Tax=unknown RepID=UPI0003D069E4
Multicopper oxidase {ECO:0000313|EMBL:ESZ20136.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
putative multicopper oxidase
Displaying items 151-180 of 197 in total

View Taxonomy