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SCNpilot_cont_300_bf_scaffold_84_curated_170

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(188033..188716)

Top 3 Functional Annotations

Value Algorithm Source
Heavy metal response regulator n=1 Tax=Variovorax sp. CF313 RepID=J2L499_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 225.0
  • Bit_score: 409
  • Evalue 2.10e-111
Heavy metal response regulator {ECO:0000313|EMBL:EJL80028.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 225.0
  • Bit_score: 409
  • Evalue 2.90e-111
winged helix family two component heavy metal response transcriptional regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 223.0
  • Bit_score: 326
  • Evalue 9.50e-87

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGCGCATACTGGTCATTGAAGACGAGCACAAGCTCGGCGACTACCTTGTTAAAGGCCTCACTGAGAGCGGCTTCGTGGTGGACTTGGCGCGCTCTGGTCTCGAGGGCCGCGCCCTGGCGCTCGACGGCGACTACGACTTGGTGGTACTCGACGTGATGCTGCCGGGAATCGACGGATTCGCCGTGCTGGAGGCCGTGCGCAAGATCAAATCCATGCCGGTGCTGATGCTCACGGCGCGCGACGAAGTGGCAGACCGCGTGCGCGGACTTCAAAGCGGTGCGGACGACTACCTTGCCAAGCCCTTCGCGTTCTCGGAGCTGCTCGCCCGGATCCAGGCACTGCTGCGCCGCGGCAAGCTGCACGAGGTGTCCAACTATGCGCTGAAGGATTTGCACCTCGACGTGGTCGCACGCAGGGCCTCCCGCAACGGGCAACGGCTTGACCTCACGGCCAAGGAGTTCGCACTGTTGACCTTGCTCATGCGCCGCCAGGGCAACGTGCTGTCGCGCACCCAGTTGGCCGAGCAGGTGTGGGACATCAATTTCGACAGCGACACCAACATCGTGGAAGTGGCCATCCGGCGGCTGCGCAGCAAGATCGACGATCCTTTCGAAGAGAAGCTGCTGCACACGGTACGCGGCATGGGATATGTGCTGGAGAGCCGGCAAGGCGGCATCCCGTGA
PROTEIN sequence
Length: 228
MRILVIEDEHKLGDYLVKGLTESGFVVDLARSGLEGRALALDGDYDLVVLDVMLPGIDGFAVLEAVRKIKSMPVLMLTARDEVADRVRGLQSGADDYLAKPFAFSELLARIQALLRRGKLHEVSNYALKDLHLDVVARRASRNGQRLDLTAKEFALLTLLMRRQGNVLSRTQLAEQVWDINFDSDTNIVEVAIRRLRSKIDDPFEEKLLHTVRGMGYVLESRQGGIP*