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SCNpilot_cont_300_bf_scaffold_84_curated_157

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(170374..173538)

Top 3 Functional Annotations

Value Algorithm Source
Heavy metal efflux pump CzcA n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q126Z3_POLSJ similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 999.99
  • Bit_score: 1874
  • Evalue 0.0
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:ABE45399.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 999.99
  • Bit_score: 1874
  • Evalue 0.0
heavy metal efflux pump CzcA; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 999.99
  • Bit_score: 1874
  • Evalue 0.0

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Taxonomy

Polaromonas sp. JS666 → Polaromonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3165
ATGATCGCCAAGCTCATCCGGTGGTCCATCGCCAATCGCTTCCTCGTGCTGCTGGCCACGGCAATGCTCAGCGCCTGGGGCGTGTATTCGGTCTTGCGCACGCCACTGGATGCGCTACCCGACCTCTCGGACGTGCAGGTCATCATTCGCACGAGCTATCCGGGGCAGGCGCCGCGCATTGTCGAGAACCAGATCACCTACCCGCTGACCACCACCATGCTGTCTGTGCCGGGCGCCAAGACAGTCCGAGGCTATTCGTTCTTCGGAGATTCATTCGTCTATGTGCTGTTCGAGGACGGCACCGATCTGTACTGGGCGCGCTCGCGGGTGCTGGAATACCTGAACCAGGTGCAGTCACGCCTGCCGGCGGCTGCCAAGGCTTCGCTCGGGCCCGACGCCACTGGCGTCGGGTGGATCTACCAGTACGCGCTGGTCGACCGCGGCGGCACACAGGACGCCTCGCAGCTGCGCGCCTTGCAAGACTGGTTCCTCAAGTACGAACTCAAGACGGTGCCCAACGTGGCCGAGGTCGCGTCGATCGGTGGCATGGTGCGCCAGTACCAGGTCGTGCTCGATCCGGAGAAGCTCGCCGCCTACCGGATCCCGCACACCAAGGCGGTGGAGGCGATCCAGAAAGCCAACCAGGAAACCGGCGGCTCAGTGCTCGAACTCGGCGAGGCGGAATACATGGTGCGTGCCTCGGGCTACCTCCAGGGCCTGGAGGATTTCCGCAAGATCCCGCTGATGACGACCGACGCCGGTGTCTCGGTGCGCCTGGGCGACGTCGCGCGCATCCAGGTCGGCCCGGAGATGCGCCGCGGTATCGGCGAGCTCGATGGCGAAGGCGAAGCCGTCGGCGGCGTGATCGTGATGCGCTCGGGCAAGAATGCGCTGGAGACCATCACCGCCGTCAAGGAAAAGCTCCAGACCCTGCAGGCCAGCCTGCCCAAAGGCGTGGAAATCGTGCCGACCTACGACCGCTCCAACCTGATCGAGCGAGCGGTGCGCAACCTGGGCTTCAAGCTGCTCGAGGAATTCATCGTCGTCGCGGTGGTGTGTTTCATTTTCCTGTTCCACCTGCGCTCCGCGTTCGTCGCGATCGTCTCGCTGCCGATCGGCATCCTGGCGGCCTTCATCGTGATGCGCTACCAGGGCGTCAATGCCAACATCATGTCGCTTGGTGGCATCGCCATCGCCATCGGCGCGATGGTCGATGCCGCGGTGGTGATGATCGAGAACGCCCACAAGCACATCGAGAAGTGGAAGCACGATCATCCGGACCAGACGCTGCGCGGCGAAACTCACTGGCGCGTGATCGCGGACTCGGCCGCCGAGGTGGGCCCTGCGCTGTTCTTCTCGCTCCTCATCATCACGCTGTCGTTCATTCCCGTCTTCACGCTGGAAGCTCAGGAAGGGCGGATGTTCTCGCCGCTGGCCTTCACCAAGACCTACGCGATGGCCGCCGCAGCGGGACTTTCGGTGACGTTGATTCCGGTGCTGATGGGCTACCTGATCCGCGGCAGGATTCCCGATGAGAAGACGAACCCGTTGAACCGGCTGCTCATCGCTGTCTATCAACCGTTGCTGAACGCGGTGCTGCGCTGGCCCAAACTGACGCTGGCGGGCGCCGCGGTCGTGCTGGTGCTGAGCCTGTGGCCGTTGCAGCACATCGGCGGCGAATTCATGCCGCGCCTGGACGAGGGCGACCTGCTCTACATGCCCTCGGCGCTGCCGGGCCTGTCGACGGGCAAGGCCGGCGAGCTGCTGCAACAGACCGACCGGCTGATCAAGACGGTTCCCGAGGTGGCGAGCGTCTACGGCAAGGCCGGGCGCGCGGAGTCGGCGACCGATCCGGCACCGATCGAGATGTTCGAAACGACCATCCAATTCAAGCCGCGCGAGCAGTGGCGCGCCGGCATGACGCAGGACAAGCTGGTCGAGGAGCTCGACCGCATCGTCAAGGTGCCCGGCTTGACCAACATCTGGGTGCCACCGATCCGCAACCGCATCGACATGCTGGCCACGGGCATCAAGAGCCCGGTGGGCGTGAAGGTGGCGGGCACCGACCTTGCCACCATCGACCGCATCACCGGTGAGATCGAACGCGTGCTCAAGGACGTGCCGGGTGTCTCGAGCGCCCTGGCCGAGCGGCTCACCGGTGGCCGGTACGTGGACGTGAACATCAAGCGGGACGAGGCATCGCGGTTCGGAATGAACATCGCCGACGTGCAATCGGTCATCGCCTCGGCGGTGGGTGGCGAGAACATCGGCGAGACGGTCGAAGGCCTGCAGCGTTTCCCGATCAACGTGCGCTACCCGCGCGAGATCCGCGACTCGCTGGAGCAACTGCGCTCTCTTCCGATCGTCACCGAACGCGGTGCGCGATTGGTGCTCTCCGACGTGGCGGACATTCGGATCACCGACGGGCCACCGATGCTGCGCAGCGAGAACGCTCGGTTGTCCGGCTGGGTCTACGTGGACATTCGCGGCAGGGACCTGCGTTCGGCGGTGCAGGACATGCAGCGCGTGGTTACGAAGGAAGTGAAGCTGCCCCCAGGCTACGCGGTGTCGTGGTCCGGTCAGTTCGAGTTCCTGGAGCGTGCAACGGCGAAGCTGAAGGTGGTGGTGCCGTTCACGTTGCTGATCATCTTCGTGCTGCTGTACCTGACGTTCAAGCGCTTCGACGAAGCCCTGCTGATCATGGCGGCACTGCCGTTCGCACTGGTCGGGGGCATCTGGCTGCTCTACCTGCTCAGCTATAACCTGTCCGTCGCCGGCGCGGTCGGTTTCATCGCCCTCGCGGGTGTGTCGGCGGAGTTCGGCGTGATCATGCTGCTGTACCTGAAGCACGCCTGGGACGAGCGCGTCGACGAGGGAAAGACGAGCACCGCGGACCTGCTGGACGCGATCCGCGAAGGCGCGGTGCTGCGCGTGCGACCCAAGGCCATGACGGTGGCTGTCATCCTGGCGGGTCTGTTCCCGATCATGTGGGGAACAGGCACTGGCTCGGAGGTGATGCAGCGCATTGCCGCGCCGATGGTGGGCGGGATGATCACGGCCCCGTTGCTTTCGATGTTCGTCATTCCCGCGGCCTACCTGTTGATGCGCAGGCCGCGCAAGGCATCACGGTGGACGCTTGGAAGGAGCCGCCGTGCGGCTGTCTGA
PROTEIN sequence
Length: 1055
MIAKLIRWSIANRFLVLLATAMLSAWGVYSVLRTPLDALPDLSDVQVIIRTSYPGQAPRIVENQITYPLTTTMLSVPGAKTVRGYSFFGDSFVYVLFEDGTDLYWARSRVLEYLNQVQSRLPAAAKASLGPDATGVGWIYQYALVDRGGTQDASQLRALQDWFLKYELKTVPNVAEVASIGGMVRQYQVVLDPEKLAAYRIPHTKAVEAIQKANQETGGSVLELGEAEYMVRASGYLQGLEDFRKIPLMTTDAGVSVRLGDVARIQVGPEMRRGIGELDGEGEAVGGVIVMRSGKNALETITAVKEKLQTLQASLPKGVEIVPTYDRSNLIERAVRNLGFKLLEEFIVVAVVCFIFLFHLRSAFVAIVSLPIGILAAFIVMRYQGVNANIMSLGGIAIAIGAMVDAAVVMIENAHKHIEKWKHDHPDQTLRGETHWRVIADSAAEVGPALFFSLLIITLSFIPVFTLEAQEGRMFSPLAFTKTYAMAAAAGLSVTLIPVLMGYLIRGRIPDEKTNPLNRLLIAVYQPLLNAVLRWPKLTLAGAAVVLVLSLWPLQHIGGEFMPRLDEGDLLYMPSALPGLSTGKAGELLQQTDRLIKTVPEVASVYGKAGRAESATDPAPIEMFETTIQFKPREQWRAGMTQDKLVEELDRIVKVPGLTNIWVPPIRNRIDMLATGIKSPVGVKVAGTDLATIDRITGEIERVLKDVPGVSSALAERLTGGRYVDVNIKRDEASRFGMNIADVQSVIASAVGGENIGETVEGLQRFPINVRYPREIRDSLEQLRSLPIVTERGARLVLSDVADIRITDGPPMLRSENARLSGWVYVDIRGRDLRSAVQDMQRVVTKEVKLPPGYAVSWSGQFEFLERATAKLKVVVPFTLLIIFVLLYLTFKRFDEALLIMAALPFALVGGIWLLYLLSYNLSVAGAVGFIALAGVSAEFGVIMLLYLKHAWDERVDEGKTSTADLLDAIREGAVLRVRPKAMTVAVILAGLFPIMWGTGTGSEVMQRIAAPMVGGMITAPLLSMFVIPAAYLLMRRPRKASRWTLGRSRRAAV*