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SCNpilot_cont_300_bf_scaffold_112_curated_24

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(29888..30790)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI00037197E6 similarity UNIREF
DB: UNIREF100
  • Identity: 91.0
  • Coverage: 300.0
  • Bit_score: 529
  • Evalue 1.80e-147
Putative aliphatic sulfonates transport permease protein SsuC {ECO:0000313|EMBL:CEJ15023.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 282.0
  • Bit_score: 258
  • Evalue 1.40e-65
binding-protein-dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 276.0
  • Bit_score: 243
  • Evalue 1.10e-61

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Taxonomy

bacterium YEK0313 → Bacteria

Sequences

DNA sequence
Length: 903
ATGACCACCGCCATGCTCGCCAAGACCGATTCCGTCGCATCGTCCGATGACCGTGCCTCGCCGCCCGCCGCGGCGGCGATCCAGGCAAAGCCGAAGCGCCGCGCCAACCCGCTTGCATCGACGCGGGTGCAGTCGATCCTTCTGCTTGCCGCCTTGCTCGGCGCGTGGGAAGCGGCCGTGCGGCTCTTCAAGGTGCCGCAACACCTGGTGCCGCCGGTGAGCGACATCGTGGTCGCGCTGTGGCGCGGCCTTGCGACCGGGCCGCTCGCGAAGGACGGCTTCTGGTACCACGGCGGCGTGACGGTGACCGAGATCCTGCTGGGCTTTCTCATCGGCAGCGGCGTCGGGCTCGCGATCGGCATCGTGGTGTCGCAGATGCCGAAGGTCGAAGCGCTGCTGGAGCCCTACGTCGCCGCGCTGCAGAGCGTGCCCAAGGTGGCGGTCGCGCCGATCATCGTGGTGTGGCTGGGCTTCGGCATCGGCTCGAAGGTGATGATCATCTGCCTGCTCACCTTCTTTCCGGTGCTGGTGACCAGCATCGCGGGCTTCAAGGCGGTGGACCCGGACCGCATCGACCTGCTGCGCTCGCTCTCGGCGACGCCATGGCAGATCTTTCGCAAGGCCAAGTTTCCGAGCGCGTTGCCCTACATCTTCGCTGGGCTGAACATGGCCGCCGCGTTCAGCGTGGTCGGCGCGGTGGTCGGTGAATTCGTCGGCGCGCAAGCCGGGCTCGGCGTGCTCATCCTGCAGATGGAAGCGCAGGCCGACACCGGCGGCAGCTTCGCGGTGTGCGTGGTGCTGTCGGTGATCGGCATCGTGTTGAGCAGCCTCTTGCGCCGCATTCAGCGCCGCGTGCTGCACTGGATGCCGGCCGATGCCTCGCAGCGGACGGTGAACGCCTGA
PROTEIN sequence
Length: 301
MTTAMLAKTDSVASSDDRASPPAAAAIQAKPKRRANPLASTRVQSILLLAALLGAWEAAVRLFKVPQHLVPPVSDIVVALWRGLATGPLAKDGFWYHGGVTVTEILLGFLIGSGVGLAIGIVVSQMPKVEALLEPYVAALQSVPKVAVAPIIVVWLGFGIGSKVMIICLLTFFPVLVTSIAGFKAVDPDRIDLLRSLSATPWQIFRKAKFPSALPYIFAGLNMAAAFSVVGAVVGEFVGAQAGLGVLILQMEAQADTGGSFAVCVVLSVIGIVLSSLLRRIQRRVLHWMPADASQRTVNA*