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SCNpilot_cont_300_bf_scaffold_112_curated_25

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(30805..31623)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=Variovorax paradoxus RepID=UPI00036002CA similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 272.0
  • Bit_score: 499
  • Evalue 2.40e-138
ABC transporter related {ECO:0000313|EMBL:EDT09980.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.3
  • Coverage: 273.0
  • Bit_score: 298
  • Evalue 1.10e-77
ABC transporter-like protein; K02049 NitT/TauT family transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 252.0
  • Bit_score: 294
  • Evalue 2.80e-77

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Taxonomy

Burkholderia graminis → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 819
ATGAACACGAACCACGAGCGGGCGGGTACAGGTGCAGGTGCACGCGGGCGTCCCGACTACATCCGCATCGAAGGGCTCTCGAAGCACTTCGGCGACGGCGGCGAAGGCGTGCTCGCGCTGAAGGACATCGACTGCAGCATCGAGCAGGGCAGCTTCGTGACCATCGTGGGGCCCAGCGGCTGCGGCAAGAGCACGCTGCTGCGCATCCTTGCCGGGTTGCTCGACTACGGCATCGGCCGCGTGGTGCTCGACGGCCAGCCGATCCAGGGCACGCGGCGCGATGTGGGCGTGGTGTTCCAGAGCTCGATCCTGCTGCCCTGGCGCACCATCCTCGAGAACGTGATGCTGCCGGCCGAGGTGCTGGGCATTCCGGCAAAGCAGGCGCGCGAGCGCGCCATGCAGCTGCTGCACATGGTCCGGCTGGACGGCTTCGAGCACAAGCTGCCGCGCCAGCTGAGCGGCGGCATGCAGCAGCGCGCCTCCATCGCGCGGGCGCTGCTGCACGACCCGAAGATCCTGCTGATGGACGAGCCCTTCGGCGCCCTCGATGCGATGACGCGCGAGCGCATGAACCTCGAGCTGCAGCGCATCTGGATGGAAAGCGGCAAGACGGTCGTGCTGATCACGCACTCGATTCCCGAGGCGGTGTTCCTCGGCGACAGGGTGTTCGTGATGTCGCCACGCCCCGGCACGCTCGAGCGCGTGCTGCCCATCGACCTGCCGCGTCCGCGGTCGATGGACGTGATGTCGCACCCCACCTTCGCCGCCGCGTCCCTCTCGATCCGCGAGCGCTTCTCGCATGCCGCTTCGTTCGACTGA
PROTEIN sequence
Length: 273
MNTNHERAGTGAGARGRPDYIRIEGLSKHFGDGGEGVLALKDIDCSIEQGSFVTIVGPSGCGKSTLLRILAGLLDYGIGRVVLDGQPIQGTRRDVGVVFQSSILLPWRTILENVMLPAEVLGIPAKQARERAMQLLHMVRLDGFEHKLPRQLSGGMQQRASIARALLHDPKILLMDEPFGALDAMTRERMNLELQRIWMESGKTVVLITHSIPEAVFLGDRVFVMSPRPGTLERVLPIDLPRPRSMDVMSHPTFAAASLSIRERFSHAASFD*