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SCNpilot_cont_300_bf_scaffold_180_curated_64

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 65003..65971

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI000374B28F similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 321.0
  • Bit_score: 581
  • Evalue 5.60e-163
Transcriptional regulator {ECO:0000313|EMBL:EJL72962.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 323.0
  • Bit_score: 530
  • Evalue 1.20e-147
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 312.0
  • Bit_score: 327
  • Evalue 3.50e-87

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
ATGAGCCGGATCGACCTTGCCCTGGTCGAGGCCTTCGTGCTGGTCGCCAGGAGCGGCAGCCTGACCAAGGCCGAAAGCCTTTCGGGCACGTCCAAGGCCACGCTGAGCCGGCAGCTCACGCGGCTGGAAGAGCTGCTGGGCGCGCAACTGCTGCTGCGCAGCCCGCGCCGCATCGCGCTCACCGAGGCGGGGCGCGCCTTCCTGCTGCGCGGCGAGGGGCTGCTCGACGAAGTCACGGGCCGGCTGGAGGCAGCCAGCACCGAGATCCACGAGCTGACCACGGGCGTGTCGGGCCGCCTCTCGCTGCTGTCGGATACGCAGTTCAGCACTTCCTTCGTCTGCCATGTGGTCAAGCTGTTCCTGGAGTCGCACCCCGAGGTGCGCTGCCAGCTCGATGTGGCCAACGGCTTCCACGCGCCGCGGATCGGCGACGTCGACTGCTATGTGTGCTCCGAGCCGCCCGACGCGCCGAACCTCGTGGCCAAGCTGCTCGGCCGGCTGAACTACGGGCTCTTTGCGAGCCCGCAGTACCTGGCGCGGCACGGCACCCCGTCTTCGCCGGCGGAGCTGGCGGCGCACCAGTCCATCGTGATGAAGGAGCCTTCGGGGCGCTCGCAGGTGCTGCTGGTGTCGGGCGCGCAGAGTTTTGCCTTCGAGCCGGAGCCCGCCTCCGAGACCAACGACCACTGGGTCATGAAGACCTTTTGCATCGACGGCCTTGGCATCGCGCTGCTGCCAGCTTTCTTCGTGCGGCCGGAGGTGGAGCAGGGCGTGCTCGCGCCGGTGCTGCCGCAGTGGCAGCCCGAGCCGCGCCGCATCTACTGCGCCTACCAGCGCCAGCGCTACATGGGGCAGAAGCTGCGGGCCTTCGTCGACCTGATGGCGCGCTGCGTGGTCGACATCGACTCTTACAACTACTACGTCGGGTCATCGGCGGCGCGGCGCCGCAGGGCGGGCGCGAGACCATAA
PROTEIN sequence
Length: 323
MSRIDLALVEAFVLVARSGSLTKAESLSGTSKATLSRQLTRLEELLGAQLLLRSPRRIALTEAGRAFLLRGEGLLDEVTGRLEAASTEIHELTTGVSGRLSLLSDTQFSTSFVCHVVKLFLESHPEVRCQLDVANGFHAPRIGDVDCYVCSEPPDAPNLVAKLLGRLNYGLFASPQYLARHGTPSSPAELAAHQSIVMKEPSGRSQVLLVSGAQSFAFEPEPASETNDHWVMKTFCIDGLGIALLPAFFVRPEVEQGVLAPVLPQWQPEPRRIYCAYQRQRYMGQKLRAFVDLMARCVVDIDSYNYYVGSSAARRRRAGARP*