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SCNpilot_cont_300_bf_scaffold_180_curated_73

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(76491..76934)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J3CGZ8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 146.0
  • Bit_score: 229
  • Evalue 1.90e-57
Putative transcriptional regulator {ECO:0000313|EMBL:EJL71469.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 146.0
  • Bit_score: 229
  • Evalue 2.70e-57
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 146.0
  • Bit_score: 223
  • Evalue 4.30e-56

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 444
ATGAGTACCAAGGAAAACGCAGCCGTCAGCCAGCTGCTCGCCCTGCTCGAAGCCCGCTATGCACTGCGCGTGCTCTGGGCGCTGCGCGACGGTCATGCCCAAACCTTCAGGCTGCTGCAGGACAGCGTGGGCGGCATCACTCCCAACACGCTCAACACCCGCATCAAGGAACTGCGCGAGGCCGGCATCGTCGGCCACGGCAGCGACGGCTACAGCCTCACGCTCAGCGGCCAGGACCTGCTCAAGCGGCTGTCCGACCTGCAGGCCTTTGCCGGCAAGTGGCAGCTGGGGCAGATCAAGAAGGCGGCGGCGCCGGTTGCCCCGGCCGCCTCGGCACCTGCACCGACACCCGCTACTGGCGCCCCAGTGCCCGCAGCGCAGACCCCGGCCGCGGCGCCCGTTCCCACACCCGCGCGGCCCGACGACGACACCAGCCACGGCTGA
PROTEIN sequence
Length: 148
MSTKENAAVSQLLALLEARYALRVLWALRDGHAQTFRLLQDSVGGITPNTLNTRIKELREAGIVGHGSDGYSLTLSGQDLLKRLSDLQAFAGKWQLGQIKKAAAPVAPAASAPAPTPATGAPVPAAQTPAAAPVPTPARPDDDTSHG*